| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209396398
Identifier: 209396398
GI number: 209396398
Start: 2812453
End: 2812971
Strand: Reverse
Name: 209396398
Synonym: ECH74115_3029
Alternate gene names: NA
Gene position: 2812971-2812453 (Counterclockwise)
Preceding gene: 209397008
Following gene: 209397347
Centisome position: 50.48
GC content: 57.23
Gene sequence:
>519_bases ATGGCAATGCCGCGCAAACTCAAGTTAATGAACGTCTTTCTGAACGGCTACAGCTATCAGGGCGTCGCGAAGTCCGTCAC GCTGCCAAAACTGACCCGTAAGCTCGAAAACTATCGCGGTGCGGGGATGAATGGCAGCGCACCGGTAGACCTCGGCCTTG ATGACGATGCGCTGTCAATGGAGTGGTCGCTCGGTGGCTTCCCGGATTCGGTTATCTGGGAGCTTTACGCCGCAACCGGT GTGGATGCCGTACCGATTCGTTTTGCAGGCTCTTACCAGCGCGACGATACCGGCGAAACGGTGGCCGTCGAGGTGGTCAT GCGTGGCCGTCAGAAAGAAATCGACACCGGCGAGGGTAAACAGGGAGAAGACACCGAGTCGAAAATCTCCGTGGTCTGCA CCTATTTCCGGCTGACGATGGACGGTAAGGAGCTGGTCGAAATCGACACCATCAACATGATTGAGAAGGTGAACGGCGTC GACCGGCTGGAGCAACACCGCCGCAATATCGGCCTGTGA
Upstream 100 bases:
>100_bases GGTACCTCCTCTTGAAAACCTGACCCTGCGCCAGCGTATCACCGATAAATACCTGGCAAATCTGGTCACCTCGGTTAACA GCAATTAAGGAGCCTGACCG
Downstream 100 bases:
>100_bases TTTTCATCCGGTCAGCCAGGCTGACCGGTTAACCCTGATTCAGAAGTGAGAAAACCATGAACAAAGAAAATGTGATTACC CTGGACAATCCGGTCAAGCG
Product: phage major tail tube protein FII
Products: NA
Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Tail Fiber Component Of Prophage; Tail Tube Protein FII; Phage-Related Tail Tube Protein; Phage Tail Tube Protein; Contractile Tail Tube Protein; Phage Tail Tube-Like Protein; Prophage; Pyocin R2_PP Tail Tube Protein GpFII; Pyocin R2_PP Tail Tube Protein; Phage Tail Fiber Component; Phage-Related Tail Protein; Bacteriophage P2 Tail Sheath Protein GPFII; Prophage Tail Tube Protein; Tail Sheath Protein; Phage Tail Core Protein; Tail Tube Protein Prophage; Phage Tail Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Phage Protein; Bacteriophage-Related Tail Tube FII Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATG VDAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEIDTGEGKQGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGV DRLEQHRRNIGL
Sequences:
>Translated_172_residues MAMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATG VDAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEIDTGEGKQGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGV DRLEQHRRNIGL >Mature_171_residues AMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATGV DAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEIDTGEGKQGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGVD RLEQHRRNIGL
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19069; Mature: 18938
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSM CCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEE EWSLGGFPDSVIWELYAATGVDAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEIDTGEGK EECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC QGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGVDRLEQHRRNIGL CCCCCHHHHHHEEEEEEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure AMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSM CCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEE EWSLGGFPDSVIWELYAATGVDAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEIDTGEGK EECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC QGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGVDRLEQHRRNIGL CCCCCHHHHHHEEEEEEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA