| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209396013
Identifier: 209396013
GI number: 209396013
Start: 1200915
End: 1201577
Strand: Direct
Name: 209396013
Synonym: ECH74115_1192
Alternate gene names: NA
Gene position: 1200915-1201577 (Clockwise)
Preceding gene: 209397310
Following gene: 209396757
Centisome position: 21.55
GC content: 54.75
Gene sequence:
>663_bases TTGTCAGACGATGACTGGCAGCGACTGGCTAAGGTGAAGGATCTGACGCCGGGCGAGATGACGGCAGAATCCTACGATGA TAACTACCTGGATGATGAAGACGCGGACTGGACCGCGACCGGGCAGGGGCAGAAATCTGCAGGTGATACCAGTTTTACGC TGGCCTGGAAACCGGGAGAGGAAGGCCAGAAAGGGCTTATAGGCTGGTTTGAAAGCGGCGATGTCCGGGCCTATAAAATC CGTTTTCCGAATGGCACGGTGGATGTGTTTCGTGGCTGGGTCAGCAGTATCGGTAAGGCCGTGACGGCGAAAGAAGTGAT CACCCGCACGGTGAAAGTCACTAACGTGGGTAAACCTTCTGTAGCGGAAGAACGCAGCAAAATTACGCCGGTCAGTGCGA TTAAGGTGACGCCGACATCCGGTACGGTGGCAAAAGGGAAAACAACCACCCTGACGGTTTCTTTTGAGCCGGAAAGTGCA ACAGACAAGACGTTCAGAGCGGTTTCCGCCGATCCGTCGAAAGCCACCATTAGTGTGAAAGATATGACAATTACGGTAAA CGGCGTGGCGACAGGTAAGGTGCAGATCCCTGTGGTGAGCGGAAATGGTCAGTTCGCCGCAGTGGCTGAAGTCACCGTTA CTGAAGCGGGCGCTGCAGGGTAA
Upstream 100 bases:
>100_bases GCTACGTCAAGCCGAAACACGAATTCCCCTGGAGCCGGTAAAAGGAGCCGGTACCACCCTGTGGGTTTATAACGGTCAGG GTGACGCCTATGCAAACCCG
Downstream 100 bases:
>100_bases ACGGAGGTCATACATGTTTCTGAAAACAGAACAATTTGAATATAACGGTGTGTCTGTCACGCTTTCCGAATTGTCTGCGC TGCAGCGTATCGAGCATCTT
Product: major tail protein V
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein; Tail Protein
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKI RFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESA TDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG
Sequences:
>Translated_220_residues MSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKI RFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESA TDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG >Mature_219_residues SDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIR FPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESAT DKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23215; Mature: 23084
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGE CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCC EGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPS CCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCC VAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVK HHHHHHCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEE DMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG EEEEEEECEEECEEEEEEECCCCCEEEEEEEEEECCCCCC >Mature Secondary Structure SDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTSFTLAWKPGE CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCC EGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPS CCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCC VAEERSKITPVSAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVK HHHHHHCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEE DMTITVNGVATGKVQIPVVSGNGQFAAVAEVTVTEAGAAG EEEEEEECEEECEEEEEEECCCCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA