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The map label for this gene is stfR [H]

Identifier: 209395988

GI number: 209395988

Start: 2892536

End: 2893849

Strand: Reverse

Name: stfR [H]

Synonym: ECH74115_3118

Alternate gene names: 209395988

Gene position: 2893849-2892536 (Counterclockwise)

Preceding gene: 209400205

Following gene: 209396050

Centisome position: 51.93

GC content: 60.05

Gene sequence:

>1314_bases
ATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTAGAGAACTGCACCATTCAACTGAAAGCCAG
ACGTAACAGCGCCACGGTGGTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGTCGTTACAGCATGGACGTTG
AGTACGGTCAGTACAGCGTCATTCTGTTGGTGGAGGGCTTCCCGCCGTCACATGCCGGGACCATCACCGTGTATGAAGAT
TCTCAACCGGGGACGCTGAATGATTTTCTCGGTGCCATGTCGGAGGATGACGTCCGGCCGGAGGCACTGCGTCGTTTTGA
ACTGATGGTGGAAGAAGCGGCGCGTCACGCTGAGGAGGCGAAGAAGAATGCCGGAGAGGCGGAGACATCAGCGAGGAATG
CCGGCATATCATCCAGTAAGGCGGAAGCGAGCGCGGCAAATGCTGACACTTCAGCAGGGGATGCATTGGAGTCAGCCCGG
CAGGCGGCAGAAAGTGCAGCCGCTGCAAAGCAGTCAGAGGATGCGTCCTCGTCCTCGGCTTCTGCGGCCGCTCAAAAAGC
CAGTGAGTCATCACAAAGTGCAGCAGAAGCTGAATTGTCAAGAAAGACGGCAGAAAGTGCAGCCGGTAATGCAGCCAGGG
ATGCAACGACCGCAACAGAAAAAGCCCGGGAGTCAGCAGAAAGCGCACAGTCAGCGGAACAAAGCAGGATAGCGGCGGAA
GAGGCCGTAAACCGAATCCCCACCGTGGTGGGACCTCCCGGGCCAAAGGGGGAACAGGGGCCCGCGGGTCCTCAGGGGCC
GAAGGGTGATAAGGGAGAGCGCGGTGACACCGGCCCTGTCGGGGCAACCGGCGAACGGGGACCGGCAGGTGATGCTGGTC
CGGCAGGCCCGCAGGGGCCGAAAGGTGACAGGGGAGAGCGGGGAGAGACCGGTCTGACGGGAAATGCAGGTCCACAGGGT
CCAAAGGGAGATACCGGTGCGGCAGGCCCGGCAGGCCCACAGGGACCGAAAGGAGAAACAGGTGCGGCTGGCCCGGTGGG
GGCAACCGGACCTCAGGGACCGAAGGGCGACCCGGGGGAGGCACAAATCCGTTTTCGTCTGGGGCCGGCGAGCATTATTG
AGACAAACAGCAATGGCTGGTTCCCGGATACAGATGGCGCACTCATCACCGGACTGACCTTTCTTGACCCCAAAGATGCC
ACACAGGTTCAGGGGCTGTTTCGGCATTTGCAGGTCAGGTTTGGTGACGGGCCGTGGCAGGATGTTAAGGGGCTGGATGA
AGTGGGCAGTGATACAGGCAGAACAGGAGAATGA

Upstream 100 bases:

>100_bases
GACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCG
GGCTTTTTTGTGGGGGGAAT

Downstream 100 bases:

>100_bases
CATGAATATACTAAAAAAACTTATGCAGTGTCTGTGTGGTTGCGGAAAGCATGATGGCCGTGAACACGTGCAGTCGCCTA
CAGCACAGCTGCGACTGGGA

Product: tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MAVKISGVLKDGTGKPVENCTIQLKARRNSATVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALESAR
QAAESAAAAKQSEDASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQG
PKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGEAQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDA
TQVQGLFRHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Sequences:

>Translated_437_residues
MAVKISGVLKDGTGKPVENCTIQLKARRNSATVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALESAR
QAAESAAAAKQSEDASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQG
PKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGEAQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDA
TQVQGLFRHLQVRFGDGPWQDVKGLDEVGSDTGRTGE
>Mature_436_residues
AVKISGVLKDGTGKPVENCTIQLKARRNSATVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDS
QPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALESARQ
AAESAAAAKQSEDASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEE
AVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGP
KGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGEAQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDAT
QVQGLFRHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI56847616, Length=153, Percent_Identity=41.8300653594771, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI65301115, Length=153, Percent_Identity=41.8300653594771, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI5803080, Length=111, Percent_Identity=47.7477477477478, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI55743098, Length=112, Percent_Identity=46.4285714285714, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI55743106, Length=112, Percent_Identity=46.4285714285714, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI240255535, Length=112, Percent_Identity=46.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI115392133, Length=112, Percent_Identity=50.8928571428571, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI115527062, Length=125, Percent_Identity=44, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI183583553, Length=111, Percent_Identity=42.3423423423423, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI115527066, Length=125, Percent_Identity=44, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI48762934, Length=130, Percent_Identity=47.6923076923077, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI115527070, Length=125, Percent_Identity=44, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI156616290, Length=101, Percent_Identity=43.5643564356436, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI98985806, Length=112, Percent_Identity=47.3214285714286, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI98985810, Length=112, Percent_Identity=47.3214285714286, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI299523257, Length=112, Percent_Identity=47.3214285714286, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI4502961, Length=113, Percent_Identity=46.9026548672566, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=89.4308943089431, Blast_Score=243, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17569903, Length=132, Percent_Identity=46.969696969697, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17551704, Length=202, Percent_Identity=33.6633663366337, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17535735, Length=136, Percent_Identity=41.9117647058824, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221379525, Length=133, Percent_Identity=39.8496240601504, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221379533, Length=133, Percent_Identity=39.8496240601504, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 44111; Mature: 43980

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKISGVLKDGTGKPVENCTIQLKARRNSATVVVNTVASENPDEAGRYSMDVEYGQYSV
CEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISSSKAEASAANADTSAGDALESARQAAESAAAAKQSEDASSSSA
HHHCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATQVQGLFRHLQVRFGDGPWQ
EEEEEEECCCEEEEECCCCCCCCCCCCCEECEEEECCCHHHHHHHHHHHHEEEECCCCCH
DVKGLDEVGSDTGRTGE
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AVKISGVLKDGTGKPVENCTIQLKARRNSATVVVNTVASENPDEAGRYSMDVEYGQYSV
EEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISSSKAEASAANADTSAGDALESARQAAESAAAAKQSEDASSSSA
HHHCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQIRFRLGPASIIETNSNGWFPDTDGALITGLTFLDPKDATQVQGLFRHLQVRFGDGPWQ
EEEEEEECCCEEEEECCCCCCCCCCCCCEECEEEECCCHHHHHHHHHHHHEEEECCCCCH
DVKGLDEVGSDTGRTGE
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]