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The map label for this gene is yfdL [C]

Identifier: 209395954

GI number: 209395954

Start: 2816426

End: 2817625

Strand: Reverse

Name: yfdL [C]

Synonym: ECH74115_3035

Alternate gene names: 209395954

Gene position: 2817625-2816426 (Counterclockwise)

Preceding gene: 209396493

Following gene: 209398160

Centisome position: 50.57

GC content: 51.5

Gene sequence:

>1200_bases
ATGACAGTGAAATACTACGCCATTCTGACTAATCAGGGCGCGGCACGGCTGGCTAACGCGACGATGCTCGGCAGTAAGCT
GAATCTGACGCAAATGGCCGTTGGTGATGCAAATGGTGTCTTGCCGACACCTGACCCGGCACAGACAAAACTTATTAACC
AGAAACGCATCGCGCCGCTGAATCTTCTGAGTGTTGACCCGAACAACCAGAGCCAGATTATTGCGGAGCAAATCATCCCT
GAGAACGAGGGCGGATTCTGGATCCGTGAGATTGGGCTTTATGATGATGAAGGCGTACTCATTGCGGTGGCGAACTGCCC
GGAAACGTACAAACCGCAGTTACAGGAAGGCAGCGGTCGTACCCAGACTATCCGCATGATTCTGGTTGTCACGAATACCG
AAGCCATCACGCTGAAAATCGACCCGTCGGTGGTACTGGCGACCCGTAAATACGTGGATGATAAAGTCCTGGAATTAAGG
CTGTATGTGGATGACCAGATGAGAAACCACATTGCCGCACAGGATCCTCATACCCAGTATGCGCAGAAACATAATCCGAC
ATTTACCGGAGAACCAAAAGCGCCAACGCCTGCCGCAGGAAATAACACCACGCGGATTGCGACCACTGAGTTTGTTCAGA
CCGCTATTACCGCTCTGATTAACGGCGCGCCAGACACGCTGGACACACTGAAAGAAATTGCCGCGGCCATTAACAATGAC
CCGAAATTCAGCACCACCATTAACAATGCGCTGTCAGGTAAGCAGCCACTGGATGAGACGCTGACTCATTTGAGTGGAAA
GGATGTTGCCGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGGACAGGGGAAAATCAGATAC
CGGACATGGCCTCTTTTGCCAGTGGTGATGGATGGATGAAATTACCCAACGGTAAAATCCTGCAATATGGTCGTGGTGCG
GTTACGCCGACATTATCGACGCAAACAATGAGAATTACATTCAGCATCCCTTTCCCCAAAAAAGCGGACTGCGCCATGCT
TACTCATTCTGGTGATGGCGGTGCGCCTTTAGGCGCTGGGCGAGGGTTCGTGATGACTGCAGAAGGCCCAACGTTAACCG
GCTTTAATTCTGCTTACAGAACGTCATCAACCAGCGACACGGTATCGATGAATTACAGTTGGTGGGCTGTTGGTGAGTAA

Upstream 100 bases:

>100_bases
CCCTGACGGTTTATCCCTACACCCCGGAGGCCATTATTGTCGGAGGGGATTATTTCCCGGCCTCGGCCATTCATTTAATT
GATAACCTGAGAGTAAACGC

Downstream 100 bases:

>100_bases
TTTTATTCAGGGTGATTTATATGAACGAATATGTTTATAGCGCAAGGCATAATGCTTTTTTCCCTGTGGATATGATTGAT
AAATATAAATCAGAGGGATG

Product: phage Tail Collar domain protein

Products: NA

Alternate protein names: Phage Tail Fiber Protein; Tail Collar Domain Protein; Phage-Related Tail Fibre Protein-Like Protein; Tail Fiber Protein H; Variable Tail Fibre Protein; Bacteriophage Tail Fiber Protein; Tail Fiber-Related Protein; Side Tail Fiber Protein; Phage Tail Fiber Protein H; Phage Tail Collar Domain-Containing Protein; Phage Tail Collar Domain Protein; Phage Tail Fibre Protein; Gifsy-2 Prophage Tail Fiber Protein; Variable Tail Fiber Protein; Tail Fiber Domain-Containing Protein; Tail Fiber Domain Protein; Side Tail Phage Protein; Bacteriophage Protein; Bacteriophage Tail Protein; Bacteriophage Variable Tail Fiber Protein H; Phage Variable Tail Fibre Protein; Phage Tail Fiber-Like Protein; Phage Tail Fiber Domain Protein; Phage Variable Tail Fiber Protein; Phage Tail Collar; Phage Tail Protein; Phage P2 Tail Fiber GpH-Like Protein; Phage-Like Tail Fibre Protein; Phage Protein Gph; Phage-Related Tail Fiber Protein-Like Protein; E14 Prophage; Phage-Like Tail Fiber-Like Protein; Bacteriophage Variable Tail Fibre Protein; Tail Fiber Repeat 2-Containing Protein; Tail Fiber Repeat 2 Protein; Phage Tail-Like Protein; LOW QUALITY PROTEIN GpH; Bacteriophage Large Tail Fiber Protein; Prophage Tail Fiber Protein; Tail Fiber Protein GpH; Phage Protein GpH

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPLNLLSVDPNNQSQIIAEQIIP
ENEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGRTQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDKVLELR
LYVDDQMRNHIAAQDPHTQYAQKHNPTFTGEPKAPTPAAGNNTTRIATTEFVQTAITALINGAPDTLDTLKEIAAAINND
PKFSTTINNALSGKQPLDETLTHLSGKDVAGLLAYLGLGEAAKRDVGTGENQIPDMASFASGDGWMKLPNGKILQYGRGA
VTPTLSTQTMRITFSIPFPKKADCAMLTHSGDGGAPLGAGRGFVMTAEGPTLTGFNSAYRTSSTSDTVSMNYSWWAVGE

Sequences:

>Translated_399_residues
MTVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPLNLLSVDPNNQSQIIAEQIIP
ENEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGRTQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDKVLELR
LYVDDQMRNHIAAQDPHTQYAQKHNPTFTGEPKAPTPAAGNNTTRIATTEFVQTAITALINGAPDTLDTLKEIAAAINND
PKFSTTINNALSGKQPLDETLTHLSGKDVAGLLAYLGLGEAAKRDVGTGENQIPDMASFASGDGWMKLPNGKILQYGRGA
VTPTLSTQTMRITFSIPFPKKADCAMLTHSGDGGAPLGAGRGFVMTAEGPTLTGFNSAYRTSSTSDTVSMNYSWWAVGE
>Mature_398_residues
TVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPLNLLSVDPNNQSQIIAEQIIPE
NEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGRTQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDKVLELRL
YVDDQMRNHIAAQDPHTQYAQKHNPTFTGEPKAPTPAAGNNTTRIATTEFVQTAITALINGAPDTLDTLKEIAAAINNDP
KFSTTINNALSGKQPLDETLTHLSGKDVAGLLAYLGLGEAAKRDVGTGENQIPDMASFASGDGWMKLPNGKILQYGRGAV
TPTLSTQTMRITFSIPFPKKADCAMLTHSGDGGAPLGAGRGFVMTAEGPTLTGFNSAYRTSSTSDTVSMNYSWWAVGE

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42782; Mature: 42651

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPL
CEEEEEEEEECCCHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCE
NLLSVDPNNQSQIIAEQIIPENEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGR
EEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHCCCCC
TQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDKVLELRLYVDDQMRNHIAAQDPHTQY
EEEEEEEEEEECCEEEEEEECCCEEEEEHHHCCCEEEEEEEEECHHHHCCCCCCCCCHHH
AQKHNPTFTGEPKAPTPAAGNNTTRIATTEFVQTAITALINGAPDTLDTLKEIAAAINND
HHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PKFSTTINNALSGKQPLDETLTHLSGKDVAGLLAYLGLGEAAKRDVGTGENQIPDMASFA
CCEEHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHC
SGDGWMKLPNGKILQYGRGAVTPTLSTQTMRITFSIPFPKKADCAMLTHSGDGGAPLGAG
CCCCEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCC
RGFVMTAEGPTLTGFNSAYRTSSTSDTVSMNYSWWAVGE
CCEEEECCCCEECCCCHHHCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
TVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPL
EEEEEEEEECCCHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCE
NLLSVDPNNQSQIIAEQIIPENEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGR
EEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHCCCCC
TQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDKVLELRLYVDDQMRNHIAAQDPHTQY
EEEEEEEEEEECCEEEEEEECCCEEEEEHHHCCCEEEEEEEEECHHHHCCCCCCCCCHHH
AQKHNPTFTGEPKAPTPAAGNNTTRIATTEFVQTAITALINGAPDTLDTLKEIAAAINND
HHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PKFSTTINNALSGKQPLDETLTHLSGKDVAGLLAYLGLGEAAKRDVGTGENQIPDMASFA
CCEEHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHC
SGDGWMKLPNGKILQYGRGAVTPTLSTQTMRITFSIPFPKKADCAMLTHSGDGGAPLGAG
CCCCEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCC
RGFVMTAEGPTLTGFNSAYRTSSTSDTVSMNYSWWAVGE
CCEEEECCCCEECCCCHHHCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA