| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209395833
Identifier: 209395833
GI number: 209395833
Start: 1004430
End: 1004759
Strand: Reverse
Name: 209395833
Synonym: ECH74115_0986
Alternate gene names: NA
Gene position: 1004759-1004430 (Counterclockwise)
Preceding gene: 209396385
Following gene: 209398772
Centisome position: 18.03
GC content: 46.06
Gene sequence:
>330_bases ATGAGCGATAAATTACAAATGATGCTGGAAGATGCAAAGGAACTGAATGCACTGGGCCTGATGTCTGATAGTGAGGTTGA TGCCATTGCCGTCATGGTCAAAGCCCGTGAAGTCAGCGCCCGTATAGCCAAAGTCAAATCAATGACGGGTGAAGAGATCA AAGCCATCCGCACCCGATACGGCATGTCACAATCCGTGCTGGCACATACAATGGGAATGTCAAAAGAAAGTGTCTCGAAA TGGGAACGTAATGAAATAAAACCGAGCGGCCCGGCACTACGTATTTTGAATACATTGGCAATAAAAGGGCCGGAAGTTTT TGCAAAGTAA
Upstream 100 bases:
>100_bases GAACTGGCAGCCTACAAAAAAATGGCAAATGCATTTCTGGCCTTTAGCAATAAGCAAATAGAGGATTTGATCGAAACTGG CTTCTTGATTGAGGTGAAAA
Downstream 100 bases:
>100_bases AATGTTTGCAAATGATTTACCACATTCATTAGTACCCCTTGATTCAGGGGTACTAACACTATTCTAATTCTACTGCCAGC TAATCTGAGCCCTGCCGTTT
Product: helix-turn-helix DNA-binding domain protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSK WERNEIKPSGPALRILNTLAIKGPEVFAK
Sequences:
>Translated_109_residues MSDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSK WERNEIKPSGPALRILNTLAIKGPEVFAK >Mature_108_residues SDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSKW ERNEIKPSGPALRILNTLAIKGPEVFAK
Specific function: Unknown
COG id: COG2944
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11982; Mature: 11851
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRY CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GMSQSVLAHTMGMSKESVSKWERNEIKPSGPALRILNTLAIKGPEVFAK CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCC >Mature Secondary Structure SDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRY CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GMSQSVLAHTMGMSKESVSKWERNEIKPSGPALRILNTLAIKGPEVFAK CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA