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The map label for this gene is yjdI

Identifier: 209395828

GI number: 209395828

Start: 5281493

End: 5281723

Strand: Direct

Name: yjdI

Synonym: ECH74115_5641

Alternate gene names: 209395828

Gene position: 5281493-5281723 (Clockwise)

Preceding gene: 209397932

Following gene: 209396935

Centisome position: 94.79

GC content: 47.62

Gene sequence:

>231_bases
ATGGATCAGGCGCTACTGGACGGGGGTTATCGCTGTTATACCGGCGAAAAGATCGATGTCTATTTCAACACTGCGATATG
TCAGCATTCTGGCAATTGCGTACGTGGCAACGGCAAGTTATTTAATCTCAAACGAAAGCCGTGGATCATGCCGGATGAAG
TCGACGTTGCCACTGTGGTTAAAGTGATTGATACGTGCCCGAGTGGTGCGCTGAAATACCGTCATAAATAA

Upstream 100 bases:

>100_bases
TATAGGGGAAGAGACTCTGGCAACGGAAACTGCCAGTGCTGTATGAAGATTCCAGGGCTATGCTTATAGTGAAAACCATA
CTGATGAGAGAGGGAAGGTC

Downstream 100 bases:

>100_bases
GCGAGGGTAAAATGGAAATACGCGAAGGCCACAATAAATTTTACATTAATGACGAACAAGGCAAGCAAATCGCTGAAATT
GTCTTTGTGCCGACCGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVVKVIDTCPSGALKYRHK

Sequences:

>Translated_76_residues
MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVVKVIDTCPSGALKYRHK
>Mature_76_residues
MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVVKVIDTCPSGALKYRHK

Specific function: Unknown

COG id: COG3592

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790568, Length=76, Percent_Identity=100, Blast_Score=162, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJDI_ECO57 (P0AF60)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A86108
- PIR:   D91267
- RefSeq:   NP_290759.1
- RefSeq:   NP_313135.1
- ProteinModelPortal:   P0AF60
- SMR:   P0AF60
- EnsemblBacteria:   EBESCT00000024363
- EnsemblBacteria:   EBESCT00000057091
- GeneID:   914209
- GeneID:   959998
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5728
- KEGG:   ecs:ECs5108
- GeneTree:   EBGT00050000011929
- HOGENOM:   HBG534277
- OMA:   WIIPDEV
- ProtClustDB:   CLSK876770
- BioCyc:   ECOL83334:ECS5108-MONOMER
- InterPro:   IPR010693

Pfam domain/function: PF06902 DUF1271

EC number: NA

Molecular weight: Translated: 8550; Mature: 8550

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVV
CCCCCCCCCEEEECCCEEEEEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCHHHHH
KVIDTCPSGALKYRHK
HHHHCCCCCCEEECCC
>Mature Secondary Structure
MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVV
CCCCCCCCCEEEECCCEEEEEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCHHHHH
KVIDTCPSGALKYRHK
HHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796