| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is FecB [H]
Identifier: 20806884
GI number: 20806884
Start: 396375
End: 397358
Strand: Direct
Name: FecB [H]
Synonym: TTE0372
Alternate gene names: 20806884
Gene position: 396375-397358 (Clockwise)
Preceding gene: 20806883
Following gene: 20806885
Centisome position: 14.74
GC content: 39.02
Gene sequence:
>984_bases TTGATAGATAAGACAAAATTTTTAGATAGGAGGGTACTTATGAAAAGATTCAAAGGGATAGTTGCGTTTCTTGTAATATT TGCTTTAGTATTTTCACTTGCTGCTTGTTCTACTCAAAATGCTACAAAGCCCCAGGAAACAGCGAAACCAGCCGAAGAGG TAAAGACACAGTTTCCGCTGAAAATTACAGACTTTCTTGGCAGAGAAGTGACGATTGAAAAGCAACCAGAGAGAATTGTA TCTTTGGTGCCTTCAGTCACAGAGCTTCTGTTTGCAATAGGGGCAGGGAGCAAAGTAGTTGGAGTTACTGATTTTGACAA TTATCCTCCAGAAGTGAAGGACATACCCAAAGTGGGAGGTTTTAAAGGACCCAACATAGAGGCGATAACGGCTCAAAAGC CTGACATAATATTTGCTTCCAGATTATCAGGGAAAGAACAGATGGAATCTTTGGAGAAGATGGGTATACCAGTTGTGGTT TTAGATGCACAAAACTTTGACCAGATATATCAATCAATAGAACTTCTTGGTAAAATAACAGGAAATGAGAAGAAGGCAGA AAAAGTCATAAACGATATGAAGAATAAAATAAAAGAGATAAGCGATAAGGTAAAAGACCTTCCAAAAGTAAAAGTATTTT ACCTGGTCTCTCTTGATGGCAACTGGACTGCAGGAAAAGGCACTTTCATAGACGAGATTATAAACCTCGCAGGTGGAGAA AATGTGGCATCCGATGTGAACGGATGGGCTCAGTACAGCATTGAAGAGCTGGTGAAGAAAAACCCTGATGTCATAATAAC ATCACCTCATGCTGGAGATGTGAAGGACCTTAAAAATATGGCTGGATACAAGGACACAAATGCCGTGAAAAATGACAAGG TATTTGTGGTGTCCAATGACGACATAATTGTAAGAGGAACAAATAGGATTGTATTAGGGCTTGAAGAAGTAGCAAAATTC TTACATCCGGAGGCATTTAAATAA
Upstream 100 bases:
>100_bases GCCATAAGGTTTTTAAAAGTTCGCCTTCGGAGGGAAGGTTGAACGGCCTTTGTGTGTTTTTAAGTGAAAAAGGTCTACCT CCGCAAGGGGTAGGCCTTTT
Downstream 100 bases:
>100_bases AGTGAAGGCTAAGAGAGGTTTTTACTTTACATCAGCATTTTTACTCCTTCTTTTGATAATGGCTCTTTCAATTTCTGCAG GGGCGGTGCACATCCCCCTG
Product: ABC-type Fe3+-siderophores transport systems, periplasmic components
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MIDKTKFLDRRVLMKRFKGIVAFLVIFALVFSLAACSTQNATKPQETAKPAEEVKTQFPLKITDFLGREVTIEKQPERIV SLVPSVTELLFAIGAGSKVVGVTDFDNYPPEVKDIPKVGGFKGPNIEAITAQKPDIIFASRLSGKEQMESLEKMGIPVVV LDAQNFDQIYQSIELLGKITGNEKKAEKVINDMKNKIKEISDKVKDLPKVKVFYLVSLDGNWTAGKGTFIDEIINLAGGE NVASDVNGWAQYSIEELVKKNPDVIITSPHAGDVKDLKNMAGYKDTNAVKNDKVFVVSNDDIIVRGTNRIVLGLEEVAKF LHPEAFK
Sequences:
>Translated_327_residues MIDKTKFLDRRVLMKRFKGIVAFLVIFALVFSLAACSTQNATKPQETAKPAEEVKTQFPLKITDFLGREVTIEKQPERIV SLVPSVTELLFAIGAGSKVVGVTDFDNYPPEVKDIPKVGGFKGPNIEAITAQKPDIIFASRLSGKEQMESLEKMGIPVVV LDAQNFDQIYQSIELLGKITGNEKKAEKVINDMKNKIKEISDKVKDLPKVKVFYLVSLDGNWTAGKGTFIDEIINLAGGE NVASDVNGWAQYSIEELVKKNPDVIITSPHAGDVKDLKNMAGYKDTNAVKNDKVFVVSNDDIIVRGTNRIVLGLEEVAKF LHPEAFK >Mature_327_residues MIDKTKFLDRRVLMKRFKGIVAFLVIFALVFSLAACSTQNATKPQETAKPAEEVKTQFPLKITDFLGREVTIEKQPERIV SLVPSVTELLFAIGAGSKVVGVTDFDNYPPEVKDIPKVGGFKGPNIEAITAQKPDIIFASRLSGKEQMESLEKMGIPVVV LDAQNFDQIYQSIELLGKITGNEKKAEKVINDMKNKIKEISDKVKDLPKVKVFYLVSLDGNWTAGKGTFIDEIINLAGGE NVASDVNGWAQYSIEELVKKNPDVIITSPHAGDVKDLKNMAGYKDTNAVKNDKVFVVSNDDIIVRGTNRIVLGLEEVAKF LHPEAFK
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786353, Length=248, Percent_Identity=28.6290322580645, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 36113; Mature: 36113
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDKTKFLDRRVLMKRFKGIVAFLVIFALVFSLAACSTQNATKPQETAKPAEEVKTQFPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCE KITDFLGREVTIEKQPERIVSLVPSVTELLFAIGAGSKVVGVTDFDNYPPEVKDIPKVGG EHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCC FKGPNIEAITAQKPDIIFASRLSGKEQMESLEKMGIPVVVLDAQNFDQIYQSIELLGKIT CCCCCEEEEECCCCCEEEEHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC GNEKKAEKVINDMKNKIKEISDKVKDLPKVKVFYLVSLDGNWTAGKGTFIDEIINLAGGE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCC NVASDVNGWAQYSIEELVKKNPDVIITSPHAGDVKDLKNMAGYKDTNAVKNDKVFVVSND CHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECC DIIVRGTNRIVLGLEEVAKFLHPEAFK CEEEEECCEEEEEHHHHHHHHCCCCCC >Mature Secondary Structure MIDKTKFLDRRVLMKRFKGIVAFLVIFALVFSLAACSTQNATKPQETAKPAEEVKTQFPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCE KITDFLGREVTIEKQPERIVSLVPSVTELLFAIGAGSKVVGVTDFDNYPPEVKDIPKVGG EHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCC FKGPNIEAITAQKPDIIFASRLSGKEQMESLEKMGIPVVVLDAQNFDQIYQSIELLGKIT CCCCCEEEEECCCCCEEEEHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC GNEKKAEKVINDMKNKIKEISDKVKDLPKVKVFYLVSLDGNWTAGKGTFIDEIINLAGGE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCC NVASDVNGWAQYSIEELVKKNPDVIITSPHAGDVKDLKNMAGYKDTNAVKNDKVFVVSND CHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECC DIIVRGTNRIVLGLEEVAKFLHPEAFK CEEEEECCEEEEEHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]