| Definition | Borrelia duttonii Ly plasmid pl15, complete sequence. |
|---|---|
| Accession | NC_011226 |
| Length | 15,049 |
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The map label for this gene is bdr_2
Identifier: 203283919
GI number: 203283919
Start: 5700
End: 6338
Strand: Reverse
Name: bdr_2
Synonym: BDU_15007
Alternate gene names: NA
Gene position: 6338-5700 (Counterclockwise)
Preceding gene: NA
Following gene: 203283915
Centisome position: 42.12
GC content: 23.47
Gene sequence:
>639_bases TTGGAAAATAATTTTAATAGTAAACTTGATAAAACAGAGGGTATTTTAAAATCTGAAATTATTTCTTTTAAATTAGAGCT TTGCAATGAGATTGATAAGGTAAAAGTAGGACTTGACAATAAAATTGACAATAAATTTAATGAGCTTGATAATAAAGTTA ATAAGGTAGAAGATAGACTAAAGTCTGAAATTACTTCTGCTAAAATAGAACTTGAGAATAAAATTGATAAAGTGAAAGTA GGACTTGACAATAAAATTGACAATAAATTTAATGAGCTTGATAATAAAGTTAACAAGGTAGAAGATAGACTAAAATCTGA AATTACTTCTGCTAAAGTAGAACTTGAGAATAAAATTGATAAAGTAAAAGTAGAACTTGAGAATAAAATTGACAATAAAT TTAGTGAGCTTGATAATAAAGTTGACAAGATAGAAGATAGACTAAAGTCTGAAATTACTTCTGTTAAAGTAGAACTTGAG AATAAAATTGATAAAGTGAAAGTAGGATTTGATAATAAATTTAATGAACTTAAAAACACAGGAAAATTACATAATTGGAT GTTTGGAACTATCATTACTCTTAATATAGGAATTTTTTTAGCTTTATTTTCAATAATATATTCTATATTAAACAAATAA
Upstream 100 bases:
>100_bases TATTGACAGAACTTATAAAGCCGGAATTAATAGAGACATTGCTACTGATTTATCTTATCGTTATTACAAAAATGAACTTA CTTACAAAGACCTTGAATAT
Downstream 100 bases:
>100_bases AATTCATCATTTATCATTGACTATAATTTAAAATTATATGTTTTCTATCCGAATGAAAATGCAGCAGATCATGTCATATG ATGATTTATTTCTATTTTTA
Product: bdr protein
Products: NA
Alternate protein names: Bdr Proitein; RepH21 Gene Homologue
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MENNFNSKLDKTEGILKSEIISFKLELCNEIDKVKVGLDNKIDNKFNELDNKVNKVEDRLKSEITSAKIELENKIDKVKV GLDNKIDNKFNELDNKVNKVEDRLKSEITSAKVELENKIDKVKVELENKIDNKFSELDNKVDKIEDRLKSEITSVKVELE NKIDKVKVGFDNKFNELKNTGKLHNWMFGTIITLNIGIFLALFSIIYSILNK
Sequences:
>Translated_212_residues MENNFNSKLDKTEGILKSEIISFKLELCNEIDKVKVGLDNKIDNKFNELDNKVNKVEDRLKSEITSAKIELENKIDKVKV GLDNKIDNKFNELDNKVNKVEDRLKSEITSAKVELENKIDKVKVELENKIDNKFSELDNKVDKIEDRLKSEITSVKVELE NKIDKVKVGFDNKFNELKNTGKLHNWMFGTIITLNIGIFLALFSIIYSILNK >Mature_212_residues MENNFNSKLDKTEGILKSEIISFKLELCNEIDKVKVGLDNKIDNKFNELDNKVNKVEDRLKSEITSAKIELENKIDKVKV GLDNKIDNKFNELDNKVNKVEDRLKSEITSAKVELENKIDKVKVELENKIDNKFSELDNKVDKIEDRLKSEITSVKVELE NKIDKVKVGFDNKFNELKNTGKLHNWMFGTIITLNIGIFLALFSIIYSILNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24491; Mature: 24491
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNFNSKLDKTEGILKSEIISFKLELCNEIDKVKVGLDNKIDNKFNELDNKVNKVEDRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KSEITSAKIELENKIDKVKVGLDNKIDNKFNELDNKVNKVEDRLKSEITSAKVELENKID HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVKVELENKIDNKFSELDNKVDKIEDRLKSEITSVKVELENKIDKVKVGFDNKFNELKNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHC GKLHNWMFGTIITLNIGIFLALFSIIYSILNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MENNFNSKLDKTEGILKSEIISFKLELCNEIDKVKVGLDNKIDNKFNELDNKVNKVEDRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KSEITSAKIELENKIDKVKVGLDNKIDNKFNELDNKVNKVEDRLKSEITSAKVELENKID HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVKVELENKIDNKFSELDNKVDKIEDRLKSEITSVKVELENKIDKVKVGFDNKFNELKNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHC GKLHNWMFGTIITLNIGIFLALFSIIYSILNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA