| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094678
Identifier: 20094678
GI number: 20094678
Start: 1226308
End: 1226547
Strand: Reverse
Name: 20094678
Synonym: MK1242
Alternate gene names: NA
Gene position: 1226547-1226308 (Counterclockwise)
Preceding gene: 20094679
Following gene: 20094677
Centisome position: 72.36
GC content: 69.58
Gene sequence:
>240_bases TTGATCCGACGCGACGTGAAGGTCTTCCGGTGCTCCCGGTGCGGCGAGATCATCGAGGTACCGTACGGCGCCCCCAAACC CTCGAGCTGTCCGAACTGTGGAGCCCCAGCCGTGTTCATCCACCGGCTGAACCCCGGGCCGGGTACCTGGGGAAGCTACG CCGGTCTCGGACGCGGTATGGGTCGCGGCGGTCCCGGCCGCGGAGGTCGCGGTGGTCCGGGACGAGGGGGTCCCAGGTAA
Upstream 100 bases:
>100_bases CGTCGAGGTAGACGCCTCCAAGTGTCGCGCCTGCGGATCGTGCGCCCGGGTGTGTCCCACGGGTGCTCTCCGGATGGAGC CCAAGAGGGGGTGATCGGGT
Downstream 100 bases:
>100_bases TTGCGCGTGGCCGTGATGGTGGAAGGTGACGGGGTGTCCTCCCGGTTCGCCCGAGCTCCTGAGATCCGCGTGTACGAGGT GCAGGATGACGACGTCGAGC
Product: Zn-ribbon-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MIRRDVKVFRCSRCGEIIEVPYGAPKPSSCPNCGAPAVFIHRLNPGPGTWGSYAGLGRGMGRGGPGRGGRGGPGRGGPR
Sequences:
>Translated_79_residues MIRRDVKVFRCSRCGEIIEVPYGAPKPSSCPNCGAPAVFIHRLNPGPGTWGSYAGLGRGMGRGGPGRGGRGGPGRGGPR >Mature_79_residues MIRRDVKVFRCSRCGEIIEVPYGAPKPSSCPNCGAPAVFIHRLNPGPGTWGSYAGLGRGMGRGGPGRGGRGGPGRGGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8135; Mature: 8135
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRDVKVFRCSRCGEIIEVPYGAPKPSSCPNCGAPAVFIHRLNPGPGTWGSYAGLGRGM CCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC GRGGPGRGGRGGPGRGGPR CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRRDVKVFRCSRCGEIIEVPYGAPKPSSCPNCGAPAVFIHRLNPGPGTWGSYAGLGRGM CCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC GRGGPGRGGRGGPGRGGPR CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA