Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094578

Identifier: 20094578

GI number: 20094578

Start: 1117919

End: 1118431

Strand: Reverse

Name: 20094578

Synonym: MK1142

Alternate gene names: NA

Gene position: 1118431-1117919 (Counterclockwise)

Preceding gene: 20094579

Following gene: 20094577

Centisome position: 65.99

GC content: 69.98

Gene sequence:

>513_bases
ATGCGCACGTTCCAGTTCCATCCTGTCACGACCGCGGTCCTCCGCACCCCCGAGCTGGACGAGGGTGCCCTCTTCAGGCT
CCGAGACGACCGCTGGGTCGAAGTGGCTTCCGGGGACCTGCCGGGTACGTTCGAGCGGTTCTTCCGGCGGTTGGGTGAGG
CGCGGTCCGAGTGGCGTGAGGGTGTCCTCCGGGTCGAGGGCCCACCGGGCGCTGAGGTCGTGCTCCTCGTGCCCGACCCG
GAGGGGTTTCCGGTGACCGAGGACTCGACGTTCCTCGAGGACGGACCATTACCCGAGGGTGCGCACGTGCTCCTCGGGGA
GCGCGTGAGGGCCTTCAGGACGCACGTGCCCTGGAGGGTACGGCTCCCCTTCGAGGTCGCGAGGGAGTCGCTCGTGAGCG
TGCGCTGGGTCGAGGGGAGCACGTACTACGAGCACTCGGACTGGGCCGCACACGACTGGGATAGGGCTGCGGTGTCGCAC
CCGGCGAGGCCCAGGCCCGAGCTCCGGGTGTGA

Upstream 100 bases:

>100_bases
TCATCTCGTTTATCGTTAAATTAATACCCGTTGGTACCGGGAGTGATATCGGGAGGTCGCACGGTAGGGGCGGCCCTCTT
GGCGTGGGAGGGTGGACGCT

Downstream 100 bases:

>100_bases
ACGCGTCACGGGGGTGTCGACGCCCGCCCGGGTTCCACGCGGTTTAACTCATCGTACCGTGACCGGGGGACTCTCGGGGG
AACCGTCGGTTTGATCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWREGVLRVEGPPGAEVVLLVPDP
EGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRVRLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSH
PARPRPELRV

Sequences:

>Translated_170_residues
MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWREGVLRVEGPPGAEVVLLVPDP
EGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRVRLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSH
PARPRPELRV
>Mature_170_residues
MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWREGVLRVEGPPGAEVVLLVPDP
EGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRVRLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSH
PARPRPELRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19521; Mature: 19521

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWRE
CCEEECCCCEEEEEECCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC
GVLRVEGPPGAEVVLLVPDPEGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRV
CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCEEE
RLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSHPARPRPELRV
ECCHHHHHHHHHEEEEECCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWRE
CCEEECCCCEEEEEECCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC
GVLRVEGPPGAEVVLLVPDPEGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRV
CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCEEE
RLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSHPARPRPELRV
ECCHHHHHHHHHEEEEECCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA