| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094578
Identifier: 20094578
GI number: 20094578
Start: 1117919
End: 1118431
Strand: Reverse
Name: 20094578
Synonym: MK1142
Alternate gene names: NA
Gene position: 1118431-1117919 (Counterclockwise)
Preceding gene: 20094579
Following gene: 20094577
Centisome position: 65.99
GC content: 69.98
Gene sequence:
>513_bases ATGCGCACGTTCCAGTTCCATCCTGTCACGACCGCGGTCCTCCGCACCCCCGAGCTGGACGAGGGTGCCCTCTTCAGGCT CCGAGACGACCGCTGGGTCGAAGTGGCTTCCGGGGACCTGCCGGGTACGTTCGAGCGGTTCTTCCGGCGGTTGGGTGAGG CGCGGTCCGAGTGGCGTGAGGGTGTCCTCCGGGTCGAGGGCCCACCGGGCGCTGAGGTCGTGCTCCTCGTGCCCGACCCG GAGGGGTTTCCGGTGACCGAGGACTCGACGTTCCTCGAGGACGGACCATTACCCGAGGGTGCGCACGTGCTCCTCGGGGA GCGCGTGAGGGCCTTCAGGACGCACGTGCCCTGGAGGGTACGGCTCCCCTTCGAGGTCGCGAGGGAGTCGCTCGTGAGCG TGCGCTGGGTCGAGGGGAGCACGTACTACGAGCACTCGGACTGGGCCGCACACGACTGGGATAGGGCTGCGGTGTCGCAC CCGGCGAGGCCCAGGCCCGAGCTCCGGGTGTGA
Upstream 100 bases:
>100_bases TCATCTCGTTTATCGTTAAATTAATACCCGTTGGTACCGGGAGTGATATCGGGAGGTCGCACGGTAGGGGCGGCCCTCTT GGCGTGGGAGGGTGGACGCT
Downstream 100 bases:
>100_bases ACGCGTCACGGGGGTGTCGACGCCCGCCCGGGTTCCACGCGGTTTAACTCATCGTACCGTGACCGGGGGACTCTCGGGGG AACCGTCGGTTTGATCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWREGVLRVEGPPGAEVVLLVPDP EGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRVRLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSH PARPRPELRV
Sequences:
>Translated_170_residues MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWREGVLRVEGPPGAEVVLLVPDP EGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRVRLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSH PARPRPELRV >Mature_170_residues MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWREGVLRVEGPPGAEVVLLVPDP EGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRVRLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSH PARPRPELRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19521; Mature: 19521
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWRE CCEEECCCCEEEEEECCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC GVLRVEGPPGAEVVLLVPDPEGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRV CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCEEE RLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSHPARPRPELRV ECCHHHHHHHHHEEEEECCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MRTFQFHPVTTAVLRTPELDEGALFRLRDDRWVEVASGDLPGTFERFFRRLGEARSEWRE CCEEECCCCEEEEEECCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC GVLRVEGPPGAEVVLLVPDPEGFPVTEDSTFLEDGPLPEGAHVLLGERVRAFRTHVPWRV CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCEEE RLPFEVARESLVSVRWVEGSTYYEHSDWAAHDWDRAAVSHPARPRPELRV ECCHHHHHHHHHEEEEECCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA