Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094554

Identifier: 20094554

GI number: 20094554

Start: 1090917

End: 1091960

Strand: Reverse

Name: 20094554

Synonym: MK1118

Alternate gene names: NA

Gene position: 1091960-1090917 (Counterclockwise)

Preceding gene: 20094555

Following gene: 20094553

Centisome position: 64.42

GC content: 63.89

Gene sequence:

>1044_bases
GTGTGTTCGTGTACCCACCGGGCAGTCCTGATCGAGTACCGTGAACACGTCGTCGTCTCGGTGACGGGCGGGCGGATCGC
GGTTTCCCTGCCGGACGGATCCACGGTGGAGGTTCCCGCCGACTCGTGCCTGCTGGAGCTCGGCAGCCCGGATATGGCCG
CGTACCGAGTCGGGAACCGGCACTACGTGGGTTTCCCTATCGCGGTGACGTACCGCGGTCGGATCTACCTACTAGGGAGC
TTCCGACTGACCATGGGAGACGCCCCGATCGTGGAACGGTACGCGATGAGGGTCCTTCGTAACGGGGTCGAGTTCGACGT
CGGGTACTCCGAGATCACCGTGTACGAACCCCGAACGTTACCCGTGGACCGCGTCCTCGCACCGTTCATCCGGGCGGCTT
ACAGCGTCCGATGCACGAGCGCGGAACTCCGTGACGGTGTACTCGGGCTCACGCTGGAGGTCACCGAGGCGCGGACGGTC
GAGGTCTCCCAGGGGAAGAGCCGGGCTCCCGTCGAGCGTTATCTCCTGCTTTGCGATCTGCGAGCGGGCACCTGCCGACT
GGCCGGACCCGTAGGCGGGTCACCGACGGATGACGATCACGGAATCGTCTGCGCGTACGATCTGAACAGCGGCGAACTCA
CATTCACGATCGTGGGTGATTCCCTCCCACGGCTACCGCCGCTCCTCGAGGAACTGGGTGCCGACCCGGCGGTGATCACC
TCCCTGAAACTCGTCGGTAAGGTACTGTCGGGTGACTATTGGGCGACGTCTTGGGATTACTGGAACCTCGTGAAGCGCGC
CTCGGATCCGGCCGTACGCCATATCCTCGAGCGCTCCGGGATCGTCGCGGCGGTACCCATGCGAGTCGTCTTGCATCCGG
AACTGTTGTTGGGAGGTTACCTTCTCGCGGCCGGAACGATCGCAGGAACCTCGTTAGGGTTAGTATGGCTCGTGGGTCCC
GATATCTGCCGAGATGCGGGGCCGCCAAGACACTTCCCGGGTGCCTGTTTCGAGTCATCTACGGGCTGTTCCTGTACGGG
CTGA

Upstream 100 bases:

>100_bases
GGGAAGCTGATAAGCCGGGTTCACGACCTACGGGCCACGGAGGGAGCGGTCCGAGAACTGAACGCGGCGTTCGCCCCGGG
TGAGGTGGCATCTGTGAGCG

Downstream 100 bases:

>100_bases
CGGTACTCGCTTACGACGTCGTGGACGCACTCCGGAGCGTGGTCCTCTCGCTCTCCCGACTCCGCGCGTTCCTACCGTCA
GGATTCGAAGAAGCCGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MCSCTHRAVLIEYREHVVVSVTGGRIAVSLPDGSTVEVPADSCLLELGSPDMAAYRVGNRHYVGFPIAVTYRGRIYLLGS
FRLTMGDAPIVERYAMRVLRNGVEFDVGYSEITVYEPRTLPVDRVLAPFIRAAYSVRCTSAELRDGVLGLTLEVTEARTV
EVSQGKSRAPVERYLLLCDLRAGTCRLAGPVGGSPTDDDHGIVCAYDLNSGELTFTIVGDSLPRLPPLLEELGADPAVIT
SLKLVGKVLSGDYWATSWDYWNLVKRASDPAVRHILERSGIVAAVPMRVVLHPELLLGGYLLAAGTIAGTSLGLVWLVGP
DICRDAGPPRHFPGACFESSTGCSCTG

Sequences:

>Translated_347_residues
MCSCTHRAVLIEYREHVVVSVTGGRIAVSLPDGSTVEVPADSCLLELGSPDMAAYRVGNRHYVGFPIAVTYRGRIYLLGS
FRLTMGDAPIVERYAMRVLRNGVEFDVGYSEITVYEPRTLPVDRVLAPFIRAAYSVRCTSAELRDGVLGLTLEVTEARTV
EVSQGKSRAPVERYLLLCDLRAGTCRLAGPVGGSPTDDDHGIVCAYDLNSGELTFTIVGDSLPRLPPLLEELGADPAVIT
SLKLVGKVLSGDYWATSWDYWNLVKRASDPAVRHILERSGIVAAVPMRVVLHPELLLGGYLLAAGTIAGTSLGLVWLVGP
DICRDAGPPRHFPGACFESSTGCSCTG
>Mature_347_residues
MCSCTHRAVLIEYREHVVVSVTGGRIAVSLPDGSTVEVPADSCLLELGSPDMAAYRVGNRHYVGFPIAVTYRGRIYLLGS
FRLTMGDAPIVERYAMRVLRNGVEFDVGYSEITVYEPRTLPVDRVLAPFIRAAYSVRCTSAELRDGVLGLTLEVTEARTV
EVSQGKSRAPVERYLLLCDLRAGTCRLAGPVGGSPTDDDHGIVCAYDLNSGELTFTIVGDSLPRLPPLLEELGADPAVIT
SLKLVGKVLSGDYWATSWDYWNLVKRASDPAVRHILERSGIVAAVPMRVVLHPELLLGGYLLAAGTIAGTSLGLVWLVGP
DICRDAGPPRHFPGACFESSTGCSCTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37337; Mature: 37337

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSCTHRAVLIEYREHVVVSVTGGRIAVSLPDGSTVEVPADSCLLELGSPDMAAYRVGNR
CCCCCCCEEEEEEECEEEEEEECCEEEEECCCCCEEEECCCCEEEECCCCCEEEEEECCE
HYVGFPIAVTYRGRIYLLGSFRLTMGDAPIVERYAMRVLRNGVEFDVGYSEITVYEPRTL
EEEEEEEEEEECCEEEEEEEEEEEECCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCCC
PVDRVLAPFIRAAYSVRCTSAELRDGVLGLTLEVTEARTVEVSQGKSRAPVERYLLLCDL
CHHHHHHHHHHHHHEEEECCHHHCCCEEEEEEEECCCEEEEECCCCCCCCHHHEEEEEEC
RAGTCRLAGPVGGSPTDDDHGIVCAYDLNSGELTFTIVGDSLPRLPPLLEELGADPAVIT
CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHH
SLKLVGKVLSGDYWATSWDYWNLVKRASDPAVRHILERSGIVAAVPMRVVLHPELLLGGY
HHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHCCCEEEECEEEEECCHHHHCCH
LLAAGTIAGTSLGLVWLVGPDICRDAGPPRHFPGACFESSTGCSCTG
HHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCSCTHRAVLIEYREHVVVSVTGGRIAVSLPDGSTVEVPADSCLLELGSPDMAAYRVGNR
CCCCCCCEEEEEEECEEEEEEECCEEEEECCCCCEEEECCCCEEEECCCCCEEEEEECCE
HYVGFPIAVTYRGRIYLLGSFRLTMGDAPIVERYAMRVLRNGVEFDVGYSEITVYEPRTL
EEEEEEEEEEECCEEEEEEEEEEEECCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCCC
PVDRVLAPFIRAAYSVRCTSAELRDGVLGLTLEVTEARTVEVSQGKSRAPVERYLLLCDL
CHHHHHHHHHHHHHEEEECCHHHCCCEEEEEEEECCCEEEEECCCCCCCCHHHEEEEEEC
RAGTCRLAGPVGGSPTDDDHGIVCAYDLNSGELTFTIVGDSLPRLPPLLEELGADPAVIT
CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHH
SLKLVGKVLSGDYWATSWDYWNLVKRASDPAVRHILERSGIVAAVPMRVVLHPELLLGGY
HHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHCCCEEEECEEEEECCHHHHCCH
LLAAGTIAGTSLGLVWLVGPDICRDAGPPRHFPGACFESSTGCSCTG
HHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA