Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094552

Identifier: 20094552

GI number: 20094552

Start: 1088392

End: 1090035

Strand: Reverse

Name: 20094552

Synonym: MK1116

Alternate gene names: NA

Gene position: 1090035-1088392 (Counterclockwise)

Preceding gene: 20094553

Following gene: 20094551

Centisome position: 64.31

GC content: 59.25

Gene sequence:

>1644_bases
GTGTACAACGATAGCGACGCGTACAGTGAGGATCAAGTCAAGGCTTACGAGGATTTCCTGACTTGGTGTGAGGAGAACGG
CGTGAAGGTGGCGGTGTTTCACTATCCGGAATGTGAGTTCGAAGCGCCCGGGATCACGGCCGTAATCCGGGAACACCTGG
GCAAATCCGTCGAATTCGTCGGATCCCACGGTACCGCTCACTCTATTGCCGGACTCCCACCAGAGATCGAGCGATTGCAG
ATCGAGTACTCGTGGGAGTTCTTCAAAGAACAGAACCTAGAGCCGGGCCTCCGTAAGGACGTGGTCTCACCGTCCATCGA
GTGGGTCATCGACGAGAACTTCGTGCACGTCTGCCGCGAACTCGGGATCAAGTGGATCGTTTCCGGGTACCGGACTTGGG
AGTTCAACCCGGAGAAAGTAGTCTCGTGGCAGGGCGAAGATATGGACTACCTCGCGGACGTGCTCATCGTCAAGAAGTTG
GACATCGATGGAGACGTGGTGTACGTCTGCCCGGTGATCGATTTCGGAGAGCTCGTGGACGACGTTGAGCAGGACATAGG
CCCCTACGGCCTCGAGAGCCTTAAGGGGGCGTTCCGACGGGCCGTTGAGACGTTGCTCAACGTGGGCGCGATCAAAGGGA
ACAACGACGGAAAAGCGGACCTCGTACTGTGGGTACTGATCCACCCGTGGCAGCTGGTCGAGGAGATGGGAAGCACGGGC
AGGACCGGCCTCGATCTGATCGAGGAGTTCATCAGATGGGTTAAGAGCGGGAGCCTCGACTTCACCTTGTACGGCGTAAT
CCCAGTGCATTTCGAGCTGGAAAGACCTTCCGAGTGCCTCGAGCTAGTGCGTGAAATCGCGGAAAACCCGGACGCCTACG
GGCATCCCGATGTCACGATCAGCGACTTAGACTGGACTAGCATGGTGCACGCGAGTGATCTGCGCACGGTGGAGGAGTTG
GAGAAAAAATACCCGGAGATCGTGAAACTATGGCGGGAAGGTATGGACGTACTGAAGTCGATCGCTCCGCGGCTGCAAAG
GCTGAAGAGAACCGAGCTGGACCCGCTGGTCCGTGACGTCGTGCTCAGGACCGTCAACGAGGCTCAGCTGAGCTGCATGT
GCGAGAGCGAGGGGATCATCCAGTACCTGGAGGTCTGGAAGGCCGAACTGGAGCTGCTACGCGACTACCTCGACGGTTCG
GCTTCGCTCCTCACGACTTCGGCGGATGATAACCACAGGGTCCTGGTGTTCCAGTACTCCGACGGTGGGATAGCCGCCGT
GTTCCTGGACCGGAACTGGTGGTGTCCATCCCCCGGGGTCGTACGTGGGAAAGTGACGCTGGACCGCGCCGACCCGACGG
ATCTCGTGGTGAGAGGTGAGTTCACCTCCGTCGGGTTGAGCGATATCACCGGCGGGAGGATCGTCGTCGAGGACGAGAAT
GGGGATGTGATCGCGGAGGTCCCGTTCACGCTGGACGAGCTCGCGAGCGGTGTCACGATCAGCCTCCCGAAGGACCGACG
AGCGGACACCGTGTACGTTGTGTTGAGTGGAAACGTGCAGGGACGACTATGGGACCAATTCCAGATCGACCTGAGCCTTC
CGATCCGGTACCGCGAGCGAGTGTCAGCGGCACGCTATCCCTAA

Upstream 100 bases:

>100_bases
CATTGTCGTTCTTGTGGCTCTCCTGTTAACATTAGCAGCTCCAACTCATGCAGCTTTGTTAACAATGACCTTACCTCAGT
CAATTACAGTTCATATTACG

Downstream 100 bases:

>100_bases
TCGAGAAGACTCCGGAAGGCGCCACACTGGAGGTCCGGTACGAGACGCACACGGTAGCCTGCACTCCGGAACGGCTCGTG
ATCACCCTCTACGATCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFVGSHGTAHSIAGLPPEIERLQ
IEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRELGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKL
DIDGDVVYVCPVIDFGELVDDVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG
RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTISDLDWTSMVHASDLRTVEEL
EKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDVVLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGS
ASLLTTSADDNHRVLVFQYSDGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN
GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRERVSAARYP

Sequences:

>Translated_547_residues
MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFVGSHGTAHSIAGLPPEIERLQ
IEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRELGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKL
DIDGDVVYVCPVIDFGELVDDVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG
RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTISDLDWTSMVHASDLRTVEEL
EKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDVVLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGS
ASLLTTSADDNHRVLVFQYSDGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN
GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRERVSAARYP
>Mature_547_residues
MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFVGSHGTAHSIAGLPPEIERLQ
IEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRELGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKL
DIDGDVVYVCPVIDFGELVDDVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG
RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTISDLDWTSMVHASDLRTVEEL
EKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDVVLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGS
ASLLTTSADDNHRVLVFQYSDGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN
GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRERVSAARYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61893; Mature: 61893

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEE
GSHGTAHSIAGLPPEIERLQIEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRE
CCCCCCCCCCCCCCCHHEEEEEEEEHHHHHCCCCCCHHHHHCCCCEEEEECCHHHHHHHH
LGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKLDIDGDVVYVCPVIDFGELVD
CCCCEEECCEEEECCCHHHEEEECCCCHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHH
DVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCHHHHHHHCCCC
RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTI
CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEE
SDLDWTSMVHASDLRTVEELEKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGSASLLTTSADDNHRVLVFQYS
HHHHHCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC
DGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN
CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC
GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRER
CCEEEECCCCHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHH
VSAARYP
HHHCCCC
>Mature Secondary Structure
MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEE
GSHGTAHSIAGLPPEIERLQIEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRE
CCCCCCCCCCCCCCCHHEEEEEEEEHHHHHCCCCCCHHHHHCCCCEEEEECCHHHHHHHH
LGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKLDIDGDVVYVCPVIDFGELVD
CCCCEEECCEEEECCCHHHEEEECCCCHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHH
DVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCHHHHHHHCCCC
RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTI
CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEE
SDLDWTSMVHASDLRTVEELEKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGSASLLTTSADDNHRVLVFQYS
HHHHHCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC
DGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN
CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC
GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRER
CCEEEECCCCHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHH
VSAARYP
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA