| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094552
Identifier: 20094552
GI number: 20094552
Start: 1088392
End: 1090035
Strand: Reverse
Name: 20094552
Synonym: MK1116
Alternate gene names: NA
Gene position: 1090035-1088392 (Counterclockwise)
Preceding gene: 20094553
Following gene: 20094551
Centisome position: 64.31
GC content: 59.25
Gene sequence:
>1644_bases GTGTACAACGATAGCGACGCGTACAGTGAGGATCAAGTCAAGGCTTACGAGGATTTCCTGACTTGGTGTGAGGAGAACGG CGTGAAGGTGGCGGTGTTTCACTATCCGGAATGTGAGTTCGAAGCGCCCGGGATCACGGCCGTAATCCGGGAACACCTGG GCAAATCCGTCGAATTCGTCGGATCCCACGGTACCGCTCACTCTATTGCCGGACTCCCACCAGAGATCGAGCGATTGCAG ATCGAGTACTCGTGGGAGTTCTTCAAAGAACAGAACCTAGAGCCGGGCCTCCGTAAGGACGTGGTCTCACCGTCCATCGA GTGGGTCATCGACGAGAACTTCGTGCACGTCTGCCGCGAACTCGGGATCAAGTGGATCGTTTCCGGGTACCGGACTTGGG AGTTCAACCCGGAGAAAGTAGTCTCGTGGCAGGGCGAAGATATGGACTACCTCGCGGACGTGCTCATCGTCAAGAAGTTG GACATCGATGGAGACGTGGTGTACGTCTGCCCGGTGATCGATTTCGGAGAGCTCGTGGACGACGTTGAGCAGGACATAGG CCCCTACGGCCTCGAGAGCCTTAAGGGGGCGTTCCGACGGGCCGTTGAGACGTTGCTCAACGTGGGCGCGATCAAAGGGA ACAACGACGGAAAAGCGGACCTCGTACTGTGGGTACTGATCCACCCGTGGCAGCTGGTCGAGGAGATGGGAAGCACGGGC AGGACCGGCCTCGATCTGATCGAGGAGTTCATCAGATGGGTTAAGAGCGGGAGCCTCGACTTCACCTTGTACGGCGTAAT CCCAGTGCATTTCGAGCTGGAAAGACCTTCCGAGTGCCTCGAGCTAGTGCGTGAAATCGCGGAAAACCCGGACGCCTACG GGCATCCCGATGTCACGATCAGCGACTTAGACTGGACTAGCATGGTGCACGCGAGTGATCTGCGCACGGTGGAGGAGTTG GAGAAAAAATACCCGGAGATCGTGAAACTATGGCGGGAAGGTATGGACGTACTGAAGTCGATCGCTCCGCGGCTGCAAAG GCTGAAGAGAACCGAGCTGGACCCGCTGGTCCGTGACGTCGTGCTCAGGACCGTCAACGAGGCTCAGCTGAGCTGCATGT GCGAGAGCGAGGGGATCATCCAGTACCTGGAGGTCTGGAAGGCCGAACTGGAGCTGCTACGCGACTACCTCGACGGTTCG GCTTCGCTCCTCACGACTTCGGCGGATGATAACCACAGGGTCCTGGTGTTCCAGTACTCCGACGGTGGGATAGCCGCCGT GTTCCTGGACCGGAACTGGTGGTGTCCATCCCCCGGGGTCGTACGTGGGAAAGTGACGCTGGACCGCGCCGACCCGACGG ATCTCGTGGTGAGAGGTGAGTTCACCTCCGTCGGGTTGAGCGATATCACCGGCGGGAGGATCGTCGTCGAGGACGAGAAT GGGGATGTGATCGCGGAGGTCCCGTTCACGCTGGACGAGCTCGCGAGCGGTGTCACGATCAGCCTCCCGAAGGACCGACG AGCGGACACCGTGTACGTTGTGTTGAGTGGAAACGTGCAGGGACGACTATGGGACCAATTCCAGATCGACCTGAGCCTTC CGATCCGGTACCGCGAGCGAGTGTCAGCGGCACGCTATCCCTAA
Upstream 100 bases:
>100_bases CATTGTCGTTCTTGTGGCTCTCCTGTTAACATTAGCAGCTCCAACTCATGCAGCTTTGTTAACAATGACCTTACCTCAGT CAATTACAGTTCATATTACG
Downstream 100 bases:
>100_bases TCGAGAAGACTCCGGAAGGCGCCACACTGGAGGTCCGGTACGAGACGCACACGGTAGCCTGCACTCCGGAACGGCTCGTG ATCACCCTCTACGATCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFVGSHGTAHSIAGLPPEIERLQ IEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRELGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKL DIDGDVVYVCPVIDFGELVDDVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTISDLDWTSMVHASDLRTVEEL EKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDVVLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGS ASLLTTSADDNHRVLVFQYSDGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRERVSAARYP
Sequences:
>Translated_547_residues MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFVGSHGTAHSIAGLPPEIERLQ IEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRELGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKL DIDGDVVYVCPVIDFGELVDDVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTISDLDWTSMVHASDLRTVEEL EKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDVVLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGS ASLLTTSADDNHRVLVFQYSDGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRERVSAARYP >Mature_547_residues MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFVGSHGTAHSIAGLPPEIERLQ IEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRELGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKL DIDGDVVYVCPVIDFGELVDDVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTISDLDWTSMVHASDLRTVEEL EKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDVVLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGS ASLLTTSADDNHRVLVFQYSDGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRERVSAARYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61893; Mature: 61893
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFV CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEE GSHGTAHSIAGLPPEIERLQIEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRE CCCCCCCCCCCCCCCHHEEEEEEEEHHHHHCCCCCCHHHHHCCCCEEEEECCHHHHHHHH LGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKLDIDGDVVYVCPVIDFGELVD CCCCEEECCEEEECCCHHHEEEECCCCHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHH DVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCHHHHHHHCCCC RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTI CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEE SDLDWTSMVHASDLRTVEELEKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGSASLLTTSADDNHRVLVFQYS HHHHHCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC DGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRER CCEEEECCCCHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHH VSAARYP HHHCCCC >Mature Secondary Structure MYNDSDAYSEDQVKAYEDFLTWCEENGVKVAVFHYPECEFEAPGITAVIREHLGKSVEFV CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEE GSHGTAHSIAGLPPEIERLQIEYSWEFFKEQNLEPGLRKDVVSPSIEWVIDENFVHVCRE CCCCCCCCCCCCCCCHHEEEEEEEEHHHHHCCCCCCHHHHHCCCCEEEEECCHHHHHHHH LGIKWIVSGYRTWEFNPEKVVSWQGEDMDYLADVLIVKKLDIDGDVVYVCPVIDFGELVD CCCCEEECCEEEECCCHHHEEEECCCCHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHH DVEQDIGPYGLESLKGAFRRAVETLLNVGAIKGNNDGKADLVLWVLIHPWQLVEEMGSTG HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCHHHHHHHCCCC RTGLDLIEEFIRWVKSGSLDFTLYGVIPVHFELERPSECLELVREIAENPDAYGHPDVTI CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEE SDLDWTSMVHASDLRTVEELEKKYPEIVKLWREGMDVLKSIAPRLQRLKRTELDPLVRDV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VLRTVNEAQLSCMCESEGIIQYLEVWKAELELLRDYLDGSASLLTTSADDNHRVLVFQYS HHHHHCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC DGGIAAVFLDRNWWCPSPGVVRGKVTLDRADPTDLVVRGEFTSVGLSDITGGRIVVEDEN CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC GDVIAEVPFTLDELASGVTISLPKDRRADTVYVVLSGNVQGRLWDQFQIDLSLPIRYRER CCEEEECCCCHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHH VSAARYP HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA