Click here to switch to the map view.

The map label for this gene is 20094520

Identifier: 20094520

GI number: 20094520

Start: 1052589

End: 1054142

Strand: Reverse

Name: 20094520

Synonym: MK1084

Alternate gene names: NA

Gene position: 1054142-1052589 (Counterclockwise)

Preceding gene: 20094521

Following gene: 20094519

Centisome position: 62.19

GC content: 62.81

Gene sequence:

>1554_bases
GTGTCGGTGCGGGATAAAGTCCGGGTCCTTCGGTGTGATTGCGCGCGCGTCCTCGAGGTGGAGGGCGTAGAAACCCCGGC
TCCCTTCCTCATCCCCGAACGACTGTCCGTCGCCGTAGAGAACGTCCCCGAAGTGCGAGAACTCGTGAAGGAGCTCGAGG
AACTGGCACGGCCGTACTCCGTACGACTCACGCCGGACGACCTGCCGTCCCCGTGGACGGACCCGGCCGAAGCCCTTTCG
GACGGATCGATCACGGTGTACCGGCTCGAGTCGATCCCGGACGCTCGGGAGTTCGCGGAGGTAGTGAGCAAGATACGTCG
GAGTGGCTCGGTCCGTGCCGTGACGGTGCGAGATCCCGAATGGATCCCCCTGCTGTTTTACCTCGGGTTCGACCTCTTCG
ACGCCGCACTGTGTCTACGTCTGACGCTGGAGGATCAACTGCTGTTGGACGACTTCTCGACCGAGACCGTGGAGACGGAG
GACCGCGAAGAGCTGCTCAGGGAGAACTGGACTCAGCTACAGTTCTGCCTGCTGAGGCTCCGCGAAGCGATCCGTGAGGG
CACTTTGAGGGAACTCGTCGAGTCCGTGGCCGCGAGGCACCCCAGGATCGCCGAAGTCCTACGGGTCTGCGACCGGGAAC
GTGCCGTCGCCCGATACGTGAACCTGAACCGGAACACCCAGATCGCCTGCGCTACCGACCTATCGTTCGACCGTCCGGAG
GTCACCGAGTGGCTCCGTCGCGTTCGTCGGTACGAACCCCCGGATTGGGTGGAAGCGGTCGTCCTGCTCCCGTGCTCCGC
CCGGAAACCCTACTCACGATCGCCCACGCACCGACGTATCATGCGAATAACGTGGAATTTCCCCGTGGATGAGATCATGA
TCACCAGCCCACTCGGTGCCGTGCCGAGGGCGCTGGAGAGGACGTTTCCCGCCGCCCACTACGACGTTCGAGTCACCGGG
GAATGGAGTCGAGAGGAGATCGAGCGCTCGGCGGCGCTTATTGAGAAGATAGTGGGAGACCTCCCGATAGTGTGCCACGC
CGCGGACGGTTACCGGAAAGTCGGAAAGGAGCTGGAAGAAAGAGGATACGATGTCGTTTACACGTGCCGCCCCGATGGGA
ACCCCGCCTCCAGGGGGGCGCTCGAGGAGCTCCGCCGGACCCTAGAGGATCTCACGAAGGGTGAGCCCGGGGATCTCCGT
GAGCACGTACCCCGAGCCGTTTCGAGGTTTCAATTCGGTGTCGACGTGTTGGAGAACGTGGACTACCGATTCGACGGACA
GCGCGTACTCATCGACGGGGAGAGGGCCTTTTCAGTCCCCCCGACCTCGGGTCTCTTGACCCTATCTCAGTTGGGTGCCG
AACTTTGTGTGAGCTCCCGGGTACCGCCGATCCACGCCGAGGAGGGAACGAAAGCCGAGATGGTGGATGTTCCCGAAGAC
GTGCTCCCGGGATTCCATTGGCCGGTCGACTTGGGGGATGAGATCCGACCGTGTCGAGTGATCGCCCGACCCGAGGACGT
TCCACCCGACACAACAGTGATCGAAACCAGATAA

Upstream 100 bases:

>100_bases
GAGAAGTACTTGGGCGTGGCTCCCGACCTGGCGCGTGAGGCCGCCGAGAAGACCCGACGCGACCTGGAGGAGATCGATCG
CGAGATGAAGGAGGTGTTGG

Downstream 100 bases:

>100_bases
CTACATGCCTTCATCCAGTCAAAGAATTAAGTACTAGATACCGTTTCCTCGCCGGGCGATGGGGCTACACCGGACGGGGG
TGACTCCTATCACTGGGGTT

Product: queuine tRNA-ribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSVRDKVRVLRCDCARVLEVEGVETPAPFLIPERLSVAVENVPEVRELVKELEELARPYSVRLTPDDLPSPWTDPAEALS
DGSITVYRLESIPDAREFAEVVSKIRRSGSVRAVTVRDPEWIPLLFYLGFDLFDAALCLRLTLEDQLLLDDFSTETVETE
DREELLRENWTQLQFCLLRLREAIREGTLRELVESVAARHPRIAEVLRVCDRERAVARYVNLNRNTQIACATDLSFDRPE
VTEWLRRVRRYEPPDWVEAVVLLPCSARKPYSRSPTHRRIMRITWNFPVDEIMITSPLGAVPRALERTFPAAHYDVRVTG
EWSREEIERSAALIEKIVGDLPIVCHAADGYRKVGKELEERGYDVVYTCRPDGNPASRGALEELRRTLEDLTKGEPGDLR
EHVPRAVSRFQFGVDVLENVDYRFDGQRVLIDGERAFSVPPTSGLLTLSQLGAELCVSSRVPPIHAEEGTKAEMVDVPED
VLPGFHWPVDLGDEIRPCRVIARPEDVPPDTTVIETR

Sequences:

>Translated_517_residues
MSVRDKVRVLRCDCARVLEVEGVETPAPFLIPERLSVAVENVPEVRELVKELEELARPYSVRLTPDDLPSPWTDPAEALS
DGSITVYRLESIPDAREFAEVVSKIRRSGSVRAVTVRDPEWIPLLFYLGFDLFDAALCLRLTLEDQLLLDDFSTETVETE
DREELLRENWTQLQFCLLRLREAIREGTLRELVESVAARHPRIAEVLRVCDRERAVARYVNLNRNTQIACATDLSFDRPE
VTEWLRRVRRYEPPDWVEAVVLLPCSARKPYSRSPTHRRIMRITWNFPVDEIMITSPLGAVPRALERTFPAAHYDVRVTG
EWSREEIERSAALIEKIVGDLPIVCHAADGYRKVGKELEERGYDVVYTCRPDGNPASRGALEELRRTLEDLTKGEPGDLR
EHVPRAVSRFQFGVDVLENVDYRFDGQRVLIDGERAFSVPPTSGLLTLSQLGAELCVSSRVPPIHAEEGTKAEMVDVPED
VLPGFHWPVDLGDEIRPCRVIARPEDVPPDTTVIETR
>Mature_516_residues
SVRDKVRVLRCDCARVLEVEGVETPAPFLIPERLSVAVENVPEVRELVKELEELARPYSVRLTPDDLPSPWTDPAEALSD
GSITVYRLESIPDAREFAEVVSKIRRSGSVRAVTVRDPEWIPLLFYLGFDLFDAALCLRLTLEDQLLLDDFSTETVETED
REELLRENWTQLQFCLLRLREAIREGTLRELVESVAARHPRIAEVLRVCDRERAVARYVNLNRNTQIACATDLSFDRPEV
TEWLRRVRRYEPPDWVEAVVLLPCSARKPYSRSPTHRRIMRITWNFPVDEIMITSPLGAVPRALERTFPAAHYDVRVTGE
WSREEIERSAALIEKIVGDLPIVCHAADGYRKVGKELEERGYDVVYTCRPDGNPASRGALEELRRTLEDLTKGEPGDLRE
HVPRAVSRFQFGVDVLENVDYRFDGQRVLIDGERAFSVPPTSGLLTLSQLGAELCVSSRVPPIHAEEGTKAEMVDVPEDV
LPGFHWPVDLGDEIRPCRVIARPEDVPPDTTVIETR

Specific function: Unknown

COG id: COG1549

COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR002616 [H]

Pfam domain/function: PF01472 PUA; PF01702 TGT [H]

EC number: NA

Molecular weight: Translated: 58845; Mature: 58713

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRDKVRVLRCDCARVLEVEGVETPAPFLIPERLSVAVENVPEVRELVKELEELARPYS
CCCHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEE
VRLTPDDLPSPWTDPAEALSDGSITVYRLESIPDAREFAEVVSKIRRSGSVRAVTVRDPE
EEECCCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC
WIPLLFYLGFDLFDAALCLRLTLEDQLLLDDFSTETVETEDREELLRENWTQLQFCLLRL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
REAIREGTLRELVESVAARHPRIAEVLRVCDRERAVARYVNLNRNTQIACATDLSFDRPE
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH
VTEWLRRVRRYEPPDWVEAVVLLPCSARKPYSRSPTHRRIMRITWNFPVDEIMITSPLGA
HHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCH
VPRALERTFPAAHYDVRVTGEWSREEIERSAALIEKIVGDLPIVCHAADGYRKVGKELEE
HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH
RGYDVVYTCRPDGNPASRGALEELRRTLEDLTKGEPGDLREHVPRAVSRFQFGVDVLENV
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
DYRFDGQRVLIDGERAFSVPPTSGLLTLSQLGAELCVSSRVPPIHAEEGTKAEMVDVPED
CCEECCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
VLPGFHWPVDLGDEIRPCRVIARPEDVPPDTTVIETR
HCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
SVRDKVRVLRCDCARVLEVEGVETPAPFLIPERLSVAVENVPEVRELVKELEELARPYS
CCHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEE
VRLTPDDLPSPWTDPAEALSDGSITVYRLESIPDAREFAEVVSKIRRSGSVRAVTVRDPE
EEECCCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC
WIPLLFYLGFDLFDAALCLRLTLEDQLLLDDFSTETVETEDREELLRENWTQLQFCLLRL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
REAIREGTLRELVESVAARHPRIAEVLRVCDRERAVARYVNLNRNTQIACATDLSFDRPE
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH
VTEWLRRVRRYEPPDWVEAVVLLPCSARKPYSRSPTHRRIMRITWNFPVDEIMITSPLGA
HHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCH
VPRALERTFPAAHYDVRVTGEWSREEIERSAALIEKIVGDLPIVCHAADGYRKVGKELEE
HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH
RGYDVVYTCRPDGNPASRGALEELRRTLEDLTKGEPGDLREHVPRAVSRFQFGVDVLENV
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
DYRFDGQRVLIDGERAFSVPPTSGLLTLSQLGAELCVSSRVPPIHAEEGTKAEMVDVPED
CCEECCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
VLPGFHWPVDLGDEIRPCRVIARPEDVPPDTTVIETR
HCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]