| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is MiaB [C]
Identifier: 20094517
GI number: 20094517
Start: 1048183
End: 1049454
Strand: Reverse
Name: MiaB [C]
Synonym: MK1081
Alternate gene names: 20094517
Gene position: 1049454-1048183 (Counterclockwise)
Preceding gene: 20094518
Following gene: 20094515
Centisome position: 61.92
GC content: 65.41
Gene sequence:
>1272_bases GTGACCAAGGTCGCCGTCGAGGTGTACGGGTGTGCCGCCAACCACGACGACGGTAGACTGGTGAGGGAGCTGTTACGCCG AGAAGGTTTTGAGGTGGTCGAAGACGCTGAGAACGCGGACGTCGCCGTCCTCCTGACCTGCATCGTTCGGGACAGCGTGG ACGCCCGAATGGTGAACAGGATGCGCGAGCTGGAGCGTGTGCCGACCGTCGTAGCCGGATGCTTCCCGGAAGCCTACCCG GAGCGCGCCCGCAAGCTCCGCCCGGACGCTGCTCTCGTAGGCCCCCGACACCTCGACCGCATACCGGAAGCCGTTCGAGC CGTGCTGCGCGGCGATCGAGTGGAGTTCCTGGGTGAACGTGAAGACATCGACTGGAAGGCCGACGCTCCCCGTGAGCTGC CTAACCTCGCCGCCATCGTACCGATCGCGGAGGGCTGTCCGAACAGATGCGCGTACTGCGCCGTGAAGCTCGCACGTGGG AACCTCCGCAGCTTTCCCCCGGAGCGCATCCTGCGGCGTGTGAAGCGGGAGCTGGAGCGCGGAGCCGTCGAGATTCACCT CACCGCACAGGACACCGCGACGTACGGACTGGACCGGGGGACGAACGTCGTCGAGCTGCTGGAGGACGTGGTCGATCTCT GCTCGCGCTACGGCGCCCGGGTTCGCCTGGGTATGTTCAACCCCGGTCACGCTTATCCCATCTCGGACGACCTCGCCGAC CTCTTCGCTAGCCGAGACGACGTGCTGTACCGTTCCATCCACATGCCCGTGCAGAGCGGTGACGACGAGGTGCTGCGTCG TATGAACCGGAACTACACGGTCGAAGAGGCCTTGGAGGTGTACCGTGCCTTCGAGCGCCGACTCGGGTACTTCTCCTTCA TCACGGACGTCATCGTGGGGTTCCCGGGGGAGACCGAGGAGGCCTTCCGTAACACCCTCAGGTTCCTGGAGAGGACCCGA CCGCACATCCTGCACGCTTCCAGGTTCTGCCGACGCCCCGGGACTCCGGCGGCGCGGATGGAGGATCAGGTCCCGGAGGA CGTGAAGCTACGGAGGAGCCGAATCCTTCACCGCAAGCGCCTCGAGTGGGCCGAGGAGGCGAACCGCGAGCTGATCGGAG AGACCGTAGAGGTGACGATGGTAATGGAGAAGTGGGGACGGGACGAGCACGCGAAGAAGACGGTGTTCCGGGGCGAAGTC CCGGAACCCGGCGAGCGGTTGGAGTGTCGTATCGTGGACGCGTCTCACGCACGACTCGTGGCGGAGGTATGA
Upstream 100 bases:
>100_bases GGATGTACTGGAGGATCAGCAGGGAGGCTTACCGAGTAGTAGCCTACAACGCGTTCGTTTCGTACGTCACGGAAATACCG AGACGCTGGGGGTGATAACG
Downstream 100 bases:
>100_bases GGTCGGCGAGTACAGCCCTCTTCATCGCGAACGCTCCGTTCGCAACCGATCGTCATCCGATTCCGACCCGTGGTCGATCC GTGGCGGGTTGGTGTCCGGA
Product: 2-methylthioadenine synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTKVAVEVYGCAANHDDGRLVRELLRREGFEVVEDAENADVAVLLTCIVRDSVDARMVNRMRELERVPTVVAGCFPEAYP ERARKLRPDAALVGPRHLDRIPEAVRAVLRGDRVEFLGEREDIDWKADAPRELPNLAAIVPIAEGCPNRCAYCAVKLARG NLRSFPPERILRRVKRELERGAVEIHLTAQDTATYGLDRGTNVVELLEDVVDLCSRYGARVRLGMFNPGHAYPISDDLAD LFASRDDVLYRSIHMPVQSGDDEVLRRMNRNYTVEEALEVYRAFERRLGYFSFITDVIVGFPGETEEAFRNTLRFLERTR PHILHASRFCRRPGTPAARMEDQVPEDVKLRRSRILHRKRLEWAEEANRELIGETVEVTMVMEKWGRDEHAKKTVFRGEV PEPGERLECRIVDASHARLVAEV
Sequences:
>Translated_423_residues MTKVAVEVYGCAANHDDGRLVRELLRREGFEVVEDAENADVAVLLTCIVRDSVDARMVNRMRELERVPTVVAGCFPEAYP ERARKLRPDAALVGPRHLDRIPEAVRAVLRGDRVEFLGEREDIDWKADAPRELPNLAAIVPIAEGCPNRCAYCAVKLARG NLRSFPPERILRRVKRELERGAVEIHLTAQDTATYGLDRGTNVVELLEDVVDLCSRYGARVRLGMFNPGHAYPISDDLAD LFASRDDVLYRSIHMPVQSGDDEVLRRMNRNYTVEEALEVYRAFERRLGYFSFITDVIVGFPGETEEAFRNTLRFLERTR PHILHASRFCRRPGTPAARMEDQVPEDVKLRRSRILHRKRLEWAEEANRELIGETVEVTMVMEKWGRDEHAKKTVFRGEV PEPGERLECRIVDASHARLVAEV >Mature_422_residues TKVAVEVYGCAANHDDGRLVRELLRREGFEVVEDAENADVAVLLTCIVRDSVDARMVNRMRELERVPTVVAGCFPEAYPE RARKLRPDAALVGPRHLDRIPEAVRAVLRGDRVEFLGEREDIDWKADAPRELPNLAAIVPIAEGCPNRCAYCAVKLARGN LRSFPPERILRRVKRELERGAVEIHLTAQDTATYGLDRGTNVVELLEDVVDLCSRYGARVRLGMFNPGHAYPISDDLADL FASRDDVLYRSIHMPVQSGDDEVLRRMNRNYTVEEALEVYRAFERRLGYFSFITDVIVGFPGETEEAFRNTLRFLERTRP HILHASRFCRRPGTPAARMEDQVPEDVKLRRSRILHRKRLEWAEEANRELIGETVEVTMVMEKWGRDEHAKKTVFRGEVP EPGERLECRIVDASHARLVAEV
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TRAM domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=411, Percent_Identity=33.0900243309002, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI28872784, Length=452, Percent_Identity=28.3185840707965, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI28872782, Length=452, Percent_Identity=28.3185840707965, Blast_Score=141, Evalue=1e-33, Organism=Escherichia coli, GI1786882, Length=446, Percent_Identity=29.1479820627803, Blast_Score=164, Evalue=9e-42, Organism=Escherichia coli, GI1787057, Length=390, Percent_Identity=28.2051282051282, Blast_Score=132, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17553146, Length=470, Percent_Identity=29.7872340425532, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71996771, Length=364, Percent_Identity=27.1978021978022, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI19922432, Length=438, Percent_Identity=31.9634703196347, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI21356207, Length=421, Percent_Identity=27.3159144893112, Blast_Score=138, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006466 - InterPro: IPR007197 - InterPro: IPR002792 [H]
Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 48361; Mature: 48230
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50926 TRAM ; PS00290 IG_MHC ; PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVAVEVYGCAANHDDGRLVRELLRREGFEVVEDAENADVAVLLTCIVRDSVDARMVNR CCEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH MRELERVPTVVAGCFPEAYPERARKLRPDAALVGPRHLDRIPEAVRAVLRGDRVEFLGER HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCC EDIDWKADAPRELPNLAAIVPIAEGCPNRCAYCAVKLARGNLRSFPPERILRRVKRELER CCCCCCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC GAVEIHLTAQDTATYGLDRGTNVVELLEDVVDLCSRYGARVRLGMFNPGHAYPISDDLAD CCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHH LFASRDDVLYRSIHMPVQSGDDEVLRRMNRNYTVEEALEVYRAFERRLGYFSFITDVIVG HHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC FPGETEEAFRNTLRFLERTRPHILHASRFCRRPGTPAARMEDQVPEDVKLRRSRILHRKR CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH LEWAEEANRELIGETVEVTMVMEKWGRDEHAKKTVFRGEVPEPGERLECRIVDASHARLV HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHCCHH AEV CCC >Mature Secondary Structure TKVAVEVYGCAANHDDGRLVRELLRREGFEVVEDAENADVAVLLTCIVRDSVDARMVNR CEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH MRELERVPTVVAGCFPEAYPERARKLRPDAALVGPRHLDRIPEAVRAVLRGDRVEFLGER HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCC EDIDWKADAPRELPNLAAIVPIAEGCPNRCAYCAVKLARGNLRSFPPERILRRVKRELER CCCCCCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC GAVEIHLTAQDTATYGLDRGTNVVELLEDVVDLCSRYGARVRLGMFNPGHAYPISDDLAD CCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHH LFASRDDVLYRSIHMPVQSGDDEVLRRMNRNYTVEEALEVYRAFERRLGYFSFITDVIVG HHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC FPGETEEAFRNTLRFLERTRPHILHASRFCRRPGTPAARMEDQVPEDVKLRRSRILHRKR CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH LEWAEEANRELIGETVEVTMVMEKWGRDEHAKKTVFRGEVPEPGERLECRIVDASHARLV HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHCCHH AEV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]