| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094493
Identifier: 20094493
GI number: 20094493
Start: 1026786
End: 1027487
Strand: Direct
Name: 20094493
Synonym: MK1057
Alternate gene names: NA
Gene position: 1026786-1027487 (Clockwise)
Preceding gene: 20094491
Following gene: 20094494
Centisome position: 60.58
GC content: 65.38
Gene sequence:
>702_bases TTGTCCCTCGTGGCGGCTAGAAATCCACCTGACCCGCGGAAATTGGGTTCCTTCAAGGTGCGCCGGTGCGCGGCCTGCGG GCGGCTGATGCGGATAGAGCTGTCGGAGTGCAACTGCGTCCGCTGCAACGACCTCCGCGGTGAGCCCCTGGAGGAGGGCC CTTACATCGAGAACTCGGGCCCGTACTGCGATCGGTGCCGGGGCGGGGTCGAGCCCACGAGCCGACTGCCGGAGGTGGCC GTCGCGGTGTGTTTCCTCACGGACCGCAGGAACCACGACGTCCTGTACCGGGCTGCGGGTGCGCTGGCCGAGGTGGTCCC GCGACTCCGGGAAGAACGTCGGTTCGTGGCGGTGGGGACCCCGGTCGACGATCTGTACTTCAACCTCCGCTGCGGGATGG AGGCCGGGATCGACTTCGGAATCCGCGCGCAGATGTCCTCGATCTTCACGCACATGGGGCCCGAGTACCTCGTGATCGCC CACAATCCCGTGCGTAAGCTGCGGGGCCGACCCCGAGAGCGCTTCAGGTACACACTCGAGAGTAACATCGAGGAGCTACG CCGCGTGATCGTCCTCGAAGACGTCGTCCGTAACACCGACTTCAAGTCCGTGTACCGGGACTTGGGTCGGGAGTACCCGG ACGTGTTCGTTTTCGCGAGCTCCGGGGAGGTGGAAAAGCTCGTGGATGCACTCCGGAAGTAG
Upstream 100 bases:
>100_bases GGGTGCCTCCCCTTTACGCAGTACTCGGACCGTGGGTAATGTACGCGTTCCCGCAGCCCTCAAGATGGTCCCCTGTTCCG CCCTCGCCGGGGAGGATCGG
Downstream 100 bases:
>100_bases GGGATGATCCCAACGCTTACCGGTCGTACGGACGACCCGGACCGGTTGATGCGCGGTCTGGAGGAACTGGGTTGGACCGT CCGCGAGAAAGGTGACCGAC
Product: Zn-ribbon-containing-protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSGPYCDRCRGGVEPTSRLPEVA VAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGTPVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIA HNPVRKLRGRPRERFRYTLESNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK
Sequences:
>Translated_233_residues MSLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSGPYCDRCRGGVEPTSRLPEVA VAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGTPVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIA HNPVRKLRGRPRERFRYTLESNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK >Mature_232_residues SLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSGPYCDRCRGGVEPTSRLPEVAV AVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGTPVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIAH NPVRKLRGRPRERFRYTLESNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26556; Mature: 26425
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSG CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCCCCCCCCEECCCC PYCDRCRGGVEPTSRLPEVAVAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGT CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC PVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIAHNPVRKLRGRPRERFRYTLE CHHHHEEEEEECHHCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHHHHHHHH SNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCC >Mature Secondary Structure SLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSG CCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCCCCCCCCEECCCC PYCDRCRGGVEPTSRLPEVAVAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGT CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC PVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIAHNPVRKLRGRPRERFRYTLE CHHHHEEEEEECHHCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHHHHHHHH SNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA