Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094493

Identifier: 20094493

GI number: 20094493

Start: 1026786

End: 1027487

Strand: Direct

Name: 20094493

Synonym: MK1057

Alternate gene names: NA

Gene position: 1026786-1027487 (Clockwise)

Preceding gene: 20094491

Following gene: 20094494

Centisome position: 60.58

GC content: 65.38

Gene sequence:

>702_bases
TTGTCCCTCGTGGCGGCTAGAAATCCACCTGACCCGCGGAAATTGGGTTCCTTCAAGGTGCGCCGGTGCGCGGCCTGCGG
GCGGCTGATGCGGATAGAGCTGTCGGAGTGCAACTGCGTCCGCTGCAACGACCTCCGCGGTGAGCCCCTGGAGGAGGGCC
CTTACATCGAGAACTCGGGCCCGTACTGCGATCGGTGCCGGGGCGGGGTCGAGCCCACGAGCCGACTGCCGGAGGTGGCC
GTCGCGGTGTGTTTCCTCACGGACCGCAGGAACCACGACGTCCTGTACCGGGCTGCGGGTGCGCTGGCCGAGGTGGTCCC
GCGACTCCGGGAAGAACGTCGGTTCGTGGCGGTGGGGACCCCGGTCGACGATCTGTACTTCAACCTCCGCTGCGGGATGG
AGGCCGGGATCGACTTCGGAATCCGCGCGCAGATGTCCTCGATCTTCACGCACATGGGGCCCGAGTACCTCGTGATCGCC
CACAATCCCGTGCGTAAGCTGCGGGGCCGACCCCGAGAGCGCTTCAGGTACACACTCGAGAGTAACATCGAGGAGCTACG
CCGCGTGATCGTCCTCGAAGACGTCGTCCGTAACACCGACTTCAAGTCCGTGTACCGGGACTTGGGTCGGGAGTACCCGG
ACGTGTTCGTTTTCGCGAGCTCCGGGGAGGTGGAAAAGCTCGTGGATGCACTCCGGAAGTAG

Upstream 100 bases:

>100_bases
GGGTGCCTCCCCTTTACGCAGTACTCGGACCGTGGGTAATGTACGCGTTCCCGCAGCCCTCAAGATGGTCCCCTGTTCCG
CCCTCGCCGGGGAGGATCGG

Downstream 100 bases:

>100_bases
GGGATGATCCCAACGCTTACCGGTCGTACGGACGACCCGGACCGGTTGATGCGCGGTCTGGAGGAACTGGGTTGGACCGT
CCGCGAGAAAGGTGACCGAC

Product: Zn-ribbon-containing-protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSGPYCDRCRGGVEPTSRLPEVA
VAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGTPVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIA
HNPVRKLRGRPRERFRYTLESNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK

Sequences:

>Translated_233_residues
MSLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSGPYCDRCRGGVEPTSRLPEVA
VAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGTPVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIA
HNPVRKLRGRPRERFRYTLESNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK
>Mature_232_residues
SLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSGPYCDRCRGGVEPTSRLPEVAV
AVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGTPVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIAH
NPVRKLRGRPRERFRYTLESNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26556; Mature: 26425

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCCCCCCCCEECCCC
PYCDRCRGGVEPTSRLPEVAVAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGT
CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC
PVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIAHNPVRKLRGRPRERFRYTLE
CHHHHEEEEEECHHCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHHHHHHHH
SNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
SLVAARNPPDPRKLGSFKVRRCAACGRLMRIELSECNCVRCNDLRGEPLEEGPYIENSG
CCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCCCCCCCCEECCCC
PYCDRCRGGVEPTSRLPEVAVAVCFLTDRRNHDVLYRAAGALAEVVPRLREERRFVAVGT
CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC
PVDDLYFNLRCGMEAGIDFGIRAQMSSIFTHMGPEYLVIAHNPVRKLRGRPRERFRYTLE
CHHHHEEEEEECHHCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHHHHHHHH
SNIEELRRVIVLEDVVRNTDFKSVYRDLGREYPDVFVFASSGEVEKLVDALRK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA