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The map label for this gene is ydgH [H]

Identifier: 20094492

GI number: 20094492

Start: 1024357

End: 1026507

Strand: Reverse

Name: ydgH [H]

Synonym: MK1056

Alternate gene names: 20094492

Gene position: 1026507-1024357 (Counterclockwise)

Preceding gene: 20094495

Following gene: 20094490

Centisome position: 60.56

GC content: 62.25

Gene sequence:

>2151_bases
TTGAGGTTCAGGACGGCGATAATACTGTCCTTCCTGGCTCTGACGGCGGTCATGGCGTACGGAGCGCTCCACCTGAATGT
GGAGGTAGATCAAACGAAGTACTTACCGGATCGGTTCGAGTCCATGAAATGGCAGCACGTCGTGGAGCGTGAGCTGGGCA
CTTCGACGAAGACCCTACTGATCGTCATCGAGGCGGACGACGTCACCCGGAAACCGGTCCTCGATTACATGCGCCGTATC
GAGGACAGGTTGCGCTCCAAGCCTTACGTCGAGAATGTTCGGGGAGCTCCAGACGTTCTCAGGGAGAGCCCGGCGAACTT
CCCGGCCGCCGTCACTATGCCAGGTCTTCGACCTCTGATGTCGGAGATGGAACGGTCGAAGGAGATGTTCGTCAGTAAGG
ACCACAAGGTCGCGATCATCAGAGTGGGACTGAAGTCGGACGCGGATTACCGTAAGGTCGTGCCGGACGTTCGGCGATCG
CTCGAGCGGGACAAACCGAAGTCCGTCAAGTTCGCCGACGTCACGGGCTCCCCGGCCATCAACTACGACTTCTATCGGGG
CTTCCTCAAGGATCTGGTCACAGTGACCGCCCTCGTATCAGCCGCCGTCGCAGCGGTTCTGTACGTCGACTTCCGGCGAT
GGTGGGCCCCGGTCCTCGGACTCACGATCATCCTGTCCGCCGTGGCATGGGTCTTGGGGATCATGTACTGGCTGGGGTTC
GCCCCGTTCTACGCGACGGTCCTCCTGACCGTAGTGCTCATGCTCGGTGTCGGTATAGATTACGTGATCTTCACGCTGAC
ACGCTTCCAGGAGGAGTACGACATCAAGGGACGCGCTAAGGGCGAGGCCATCCTCACGGCGGTCCGACGTGCGGGTCGAG
CCGTGCTGATCACCGGTCTCACGGCGTCCGCGGGTTTCGCCGCCCTGGCCCTGTCGGAGTTCAGGATGGTCTCGGAGATC
GGACTCGGTATCGTGGCGGGCATCCTCACGGCCGTCGCGCTGACGCTGCTCGTCCTGCCGAGCCTGCTTCAGTCGATACC
GATCGGGCGGAAGAGTTCCGAGAAGAAGGAGGAAAGCTGGAAGGTACTCTCGATACCCGTGAGGCACCCGGTCCCGGCGA
TCGTCGCGCTGCTCGCCATCACGGGTCTACTCGGGTACGGAGCGGCCGGCGTGAAGCCAGAGGTCAACATCGAGAAGTTC
CTGGGGCACAACCTACCGTCCCTGAAGGCCCGGGACGTACTCGAGAAGCACATGGACGTGAGCCATCACTTCGCCACGAT
CGTCGTGGAGGCGCGGGACGTCCGAGATCCGAAGGTAGTCCGCTTCATGGAGAAGTTGAAGCGAGACGCGAAGCGCACCG
GCGTGGCCGCCCGCGTGTTCGGAGCCCCCGACGTGATCGGGATGGAGAAGACCGTAGAACGTCTGCCGGCGCCGATCCGC
TCGGCCCTCGAGCCGAAGGTCGAGGACATGGAGAAAGGAGTCATCTCGGGGGACGGGAAGGTCGCCGTGATCCAGGTACA
ACTGAAACCAGGGGACCCGAAGGTGCAAGGTCGGAAGATCCTGGACATGGTCCGGCACGAACACCCACCCACGGGCGTGA
AGGTGGGGGTCACGGGTCTCCCGGTGGCGTTCGCGGAGATGCACGAGCAGGTGAACGAGGACATGCGCCGGTCCACCATC
GCGTCGGCGATCGGCGTGTTGGCGATACCGACGATCGCCTTTCGAAACCCGATACCGCCGGTCTTCGGGCTCGTCGCCAT
CGGCTCGGGCATCCTATGGGCTATTGGACTCCTGGGCGGCGTGCTGCGGATAGTGCCGTCGTTCCTGGCCATGCAAACCA
CGATATGTATACTGCTCGGTATCGGAATGGACTACTGCGTGTTCCTGGCCTCACGTTACCGGGAAGAGCGGAAGGAGCAC
GGCGTCAAGGAGGCTTGGACCCATACGATGGAGCGAGCGGGACCCGGCGTACTGTTCAGCGGGCTGACCTCGGCGATCGG
TTTCCTCTCGTTGCTGCTGTCTCACACGGGTATCATGAGGAACATGGGACTCTACCAGGGGATAGGAGTGCTTTCGACGC
TGACGCTGGTGCTCGTGGGCTTCCCGGCGCTGTACGTGGTGATCAGCCGCGTGTTCAGTCGTGGGCGATGA

Upstream 100 bases:

>100_bases
CCGAATCGTCACGAGTCCCGTAACTAACCTGAATGCATCCGAGGTGACGGGGTGAAGGGATGAAAGCACGGTCTAGTCTT
CCGGCCCGAGGGCCGTCGAG

Downstream 100 bases:

>100_bases
AGCCCCATCGACTCCCAGGCACCCACTCACCGATACGTCGGTCCCACGCCCCCTCCAGCGATACCCCCGCCCCCGAACCG
TGAGCCGCATGTGCCTCTAG

Product: RND superfamily exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MRFRTAIILSFLALTAVMAYGALHLNVEVDQTKYLPDRFESMKWQHVVERELGTSTKTLLIVIEADDVTRKPVLDYMRRI
EDRLRSKPYVENVRGAPDVLRESPANFPAAVTMPGLRPLMSEMERSKEMFVSKDHKVAIIRVGLKSDADYRKVVPDVRRS
LERDKPKSVKFADVTGSPAINYDFYRGFLKDLVTVTALVSAAVAAVLYVDFRRWWAPVLGLTIILSAVAWVLGIMYWLGF
APFYATVLLTVVLMLGVGIDYVIFTLTRFQEEYDIKGRAKGEAILTAVRRAGRAVLITGLTASAGFAALALSEFRMVSEI
GLGIVAGILTAVALTLLVLPSLLQSIPIGRKSSEKKEESWKVLSIPVRHPVPAIVALLAITGLLGYGAAGVKPEVNIEKF
LGHNLPSLKARDVLEKHMDVSHHFATIVVEARDVRDPKVVRFMEKLKRDAKRTGVAARVFGAPDVIGMEKTVERLPAPIR
SALEPKVEDMEKGVISGDGKVAVIQVQLKPGDPKVQGRKILDMVRHEHPPTGVKVGVTGLPVAFAEMHEQVNEDMRRSTI
ASAIGVLAIPTIAFRNPIPPVFGLVAIGSGILWAIGLLGGVLRIVPSFLAMQTTICILLGIGMDYCVFLASRYREERKEH
GVKEAWTHTMERAGPGVLFSGLTSAIGFLSLLLSHTGIMRNMGLYQGIGVLSTLTLVLVGFPALYVVISRVFSRGR

Sequences:

>Translated_716_residues
MRFRTAIILSFLALTAVMAYGALHLNVEVDQTKYLPDRFESMKWQHVVERELGTSTKTLLIVIEADDVTRKPVLDYMRRI
EDRLRSKPYVENVRGAPDVLRESPANFPAAVTMPGLRPLMSEMERSKEMFVSKDHKVAIIRVGLKSDADYRKVVPDVRRS
LERDKPKSVKFADVTGSPAINYDFYRGFLKDLVTVTALVSAAVAAVLYVDFRRWWAPVLGLTIILSAVAWVLGIMYWLGF
APFYATVLLTVVLMLGVGIDYVIFTLTRFQEEYDIKGRAKGEAILTAVRRAGRAVLITGLTASAGFAALALSEFRMVSEI
GLGIVAGILTAVALTLLVLPSLLQSIPIGRKSSEKKEESWKVLSIPVRHPVPAIVALLAITGLLGYGAAGVKPEVNIEKF
LGHNLPSLKARDVLEKHMDVSHHFATIVVEARDVRDPKVVRFMEKLKRDAKRTGVAARVFGAPDVIGMEKTVERLPAPIR
SALEPKVEDMEKGVISGDGKVAVIQVQLKPGDPKVQGRKILDMVRHEHPPTGVKVGVTGLPVAFAEMHEQVNEDMRRSTI
ASAIGVLAIPTIAFRNPIPPVFGLVAIGSGILWAIGLLGGVLRIVPSFLAMQTTICILLGIGMDYCVFLASRYREERKEH
GVKEAWTHTMERAGPGVLFSGLTSAIGFLSLLLSHTGIMRNMGLYQGIGVLSTLTLVLVGFPALYVVISRVFSRGR
>Mature_716_residues
MRFRTAIILSFLALTAVMAYGALHLNVEVDQTKYLPDRFESMKWQHVVERELGTSTKTLLIVIEADDVTRKPVLDYMRRI
EDRLRSKPYVENVRGAPDVLRESPANFPAAVTMPGLRPLMSEMERSKEMFVSKDHKVAIIRVGLKSDADYRKVVPDVRRS
LERDKPKSVKFADVTGSPAINYDFYRGFLKDLVTVTALVSAAVAAVLYVDFRRWWAPVLGLTIILSAVAWVLGIMYWLGF
APFYATVLLTVVLMLGVGIDYVIFTLTRFQEEYDIKGRAKGEAILTAVRRAGRAVLITGLTASAGFAALALSEFRMVSEI
GLGIVAGILTAVALTLLVLPSLLQSIPIGRKSSEKKEESWKVLSIPVRHPVPAIVALLAITGLLGYGAAGVKPEVNIEKF
LGHNLPSLKARDVLEKHMDVSHHFATIVVEARDVRDPKVVRFMEKLKRDAKRTGVAARVFGAPDVIGMEKTVERLPAPIR
SALEPKVEDMEKGVISGDGKVAVIQVQLKPGDPKVQGRKILDMVRHEHPPTGVKVGVTGLPVAFAEMHEQVNEDMRRSTI
ASAIGVLAIPTIAFRNPIPPVFGLVAIGSGILWAIGLLGGVLRIVPSFLAMQTTICILLGIGMDYCVFLASRYREERKEH
GVKEAWTHTMERAGPGVLFSGLTSAIGFLSLLLSHTGIMRNMGLYQGIGVLSTLTLVLVGFPALYVVISRVFSRGR

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 78609; Mature: 78609

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRTAIILSFLALTAVMAYGALHLNVEVDQTKYLPDRFESMKWQHVVERELGTSTKTLL
CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHHCCCCEEEE
IVIEADDVTRKPVLDYMRRIEDRLRSKPYVENVRGAPDVLRESPANFPAAVTMPGLRPLM
EEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCCCCCCEEECCCHHHHH
SEMERSKEMFVSKDHKVAIIRVGLKSDADYRKVVPDVRRSLERDKPKSVKFADVTGSPAI
HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
NYDFYRGFLKDLVTVTALVSAAVAAVLYVDFRRWWAPVLGLTIILSAVAWVLGIMYWLGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APFYATVLLTVVLMLGVGIDYVIFTLTRFQEEYDIKGRAKGEAILTAVRRAGRAVLITGL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECC
TASAGFAALALSEFRMVSEIGLGIVAGILTAVALTLLVLPSLLQSIPIGRKSSEKKEESW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
KVLSIPVRHPVPAIVALLAITGLLGYGAAGVKPEVNIEKFLGHNLPSLKARDVLEKHMDV
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCH
SHHFATIVVEARDVRDPKVVRFMEKLKRDAKRTGVAARVFGAPDVIGMEKTVERLPAPIR
HHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCHHHH
SALEPKVEDMEKGVISGDGKVAVIQVQLKPGDPKVQGRKILDMVRHEHPPTGVKVGVTGL
HHCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCC
PVAFAEMHEQVNEDMRRSTIASAIGVLAIPTIAFRNPIPPVFGLVAIGSGILWAIGLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLRIVPSFLAMQTTICILLGIGMDYCVFLASRYREERKEHGVKEAWTHTMERAGPGVLFS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
GLTSAIGFLSLLLSHTGIMRNMGLYQGIGVLSTLTLVLVGFPALYVVISRVFSRGR
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFRTAIILSFLALTAVMAYGALHLNVEVDQTKYLPDRFESMKWQHVVERELGTSTKTLL
CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHHCCCCEEEE
IVIEADDVTRKPVLDYMRRIEDRLRSKPYVENVRGAPDVLRESPANFPAAVTMPGLRPLM
EEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCCCCCCEEECCCHHHHH
SEMERSKEMFVSKDHKVAIIRVGLKSDADYRKVVPDVRRSLERDKPKSVKFADVTGSPAI
HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
NYDFYRGFLKDLVTVTALVSAAVAAVLYVDFRRWWAPVLGLTIILSAVAWVLGIMYWLGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APFYATVLLTVVLMLGVGIDYVIFTLTRFQEEYDIKGRAKGEAILTAVRRAGRAVLITGL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECC
TASAGFAALALSEFRMVSEIGLGIVAGILTAVALTLLVLPSLLQSIPIGRKSSEKKEESW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
KVLSIPVRHPVPAIVALLAITGLLGYGAAGVKPEVNIEKFLGHNLPSLKARDVLEKHMDV
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCH
SHHFATIVVEARDVRDPKVVRFMEKLKRDAKRTGVAARVFGAPDVIGMEKTVERLPAPIR
HHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCHHHH
SALEPKVEDMEKGVISGDGKVAVIQVQLKPGDPKVQGRKILDMVRHEHPPTGVKVGVTGL
HHCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCC
PVAFAEMHEQVNEDMRRSTIASAIGVLAIPTIAFRNPIPPVFGLVAIGSGILWAIGLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLRIVPSFLAMQTTICILLGIGMDYCVFLASRYREERKEHGVKEAWTHTMERAGPGVLFS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
GLTSAIGFLSLLLSHTGIMRNMGLYQGIGVLSTLTLVLVGFPALYVVISRVFSRGR
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]