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The map label for this gene is 20094479

Identifier: 20094479

GI number: 20094479

Start: 1010030

End: 1010881

Strand: Direct

Name: 20094479

Synonym: MK1043

Alternate gene names: NA

Gene position: 1010030-1010881 (Clockwise)

Preceding gene: 20094476

Following gene: 20094480

Centisome position: 59.59

GC content: 57.86

Gene sequence:

>852_bases
GTGAGGTTTTACTTCGCAGTCGATAAGGCCAGGGAGCGTGGTGTGCCTATCAAGGAGTTCAAGCTGATTCAGGAGGACGG
TTCAGTGTACTGGGAAGGCAAGTTCGGGAGATCTAAGTGGGAGACATCGGGTGAGGTAATTTACGGCAATATGGTAGCTC
TATCCGGGATATATCTAGGGTTACTCAGCGGCGAGGTGAAACCGAAGACATGGCCCGAACCAGAACGATCCCGATTCGAG
AAAGGCATTACCGTCGGACTCGCTCGGATCCTGTCACTCCAGCAGGAAGATGGTGGCTGGGGATGGAAAGTAGTCCTAGT
GGAAGGCAAGACCAGGTTTCCAGCCGGCAAGGGCCATGTCCTGTACACGGCGAAGATACTCGCTAAAGTGTTGATCCCGG
CGCTGCGGTTGAACATTAAGAACGTGAGCTACGGCGGGACCACCTACGACGTCGCCGAACACGCGCGTGCGGCGGTGAGG
TTTCTCATCGACCAGCAGTTGGAGAGCGGTGGATACAGCGCCAACAAGGAGTGGTCGATGACCGAGGACCCGCTCTACAC
GGCGTGGGCCCTACGTGCGCTGTGCGAGGCGTACCGGTACAGGGACCTACTGGGGCTCGACGACGCGACCGTCCAGCAGG
TCAAAGAGGCGATCCGTAGGGCGGTCGACTGGTTACTCTCGCACCAGGAGGACGAAGGTGACTACGCCGGGCTATGGGAG
ATGAAGTCCGCAGCGATCATGGGATCCGCGTACGCCCCACCGTCGGAGGCTCAAATCGTACGTGCACTTATCCAGGCATA
CTCGATCTCGGAGGAATTAGGGTTGAACAAGGCCGAGCTCAAGGAGGCATAG

Upstream 100 bases:

>100_bases
GGGGTGAGTCGGTCTGCGCGCGATACCTGTGGCGGCCCTGATCGTCGCCCTTACCGACGTCCGCGTGGGCGGCTGACTGG
GGGAGATCATCGACAAGTCA

Downstream 100 bases:

>100_bases
ATCGGGCGCTGGAGGCGATCGTGGACTGGGCGCTGAAGTACCAGGATGCCTCGCTGGTGGAGTTCGACGGTCGGAAGGTG
CTCGGCTGGGCCTACTCGTC

Product: Terpene cyclase/mutase family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRFYFAVDKARERGVPIKEFKLIQEDGSVYWEGKFGRSKWETSGEVIYGNMVALSGIYLGLLSGEVKPKTWPEPERSRFE
KGITVGLARILSLQQEDGGWGWKVVLVEGKTRFPAGKGHVLYTAKILAKVLIPALRLNIKNVSYGGTTYDVAEHARAAVR
FLIDQQLESGGYSANKEWSMTEDPLYTAWALRALCEAYRYRDLLGLDDATVQQVKEAIRRAVDWLLSHQEDEGDYAGLWE
MKSAAIMGSAYAPPSEAQIVRALIQAYSISEELGLNKAELKEA

Sequences:

>Translated_283_residues
MRFYFAVDKARERGVPIKEFKLIQEDGSVYWEGKFGRSKWETSGEVIYGNMVALSGIYLGLLSGEVKPKTWPEPERSRFE
KGITVGLARILSLQQEDGGWGWKVVLVEGKTRFPAGKGHVLYTAKILAKVLIPALRLNIKNVSYGGTTYDVAEHARAAVR
FLIDQQLESGGYSANKEWSMTEDPLYTAWALRALCEAYRYRDLLGLDDATVQQVKEAIRRAVDWLLSHQEDEGDYAGLWE
MKSAAIMGSAYAPPSEAQIVRALIQAYSISEELGLNKAELKEA
>Mature_283_residues
MRFYFAVDKARERGVPIKEFKLIQEDGSVYWEGKFGRSKWETSGEVIYGNMVALSGIYLGLLSGEVKPKTWPEPERSRFE
KGITVGLARILSLQQEDGGWGWKVVLVEGKTRFPAGKGHVLYTAKILAKVLIPALRLNIKNVSYGGTTYDVAEHARAAVR
FLIDQQLESGGYSANKEWSMTEDPLYTAWALRALCEAYRYRDLLGLDDATVQQVKEAIRRAVDWLLSHQEDEGDYAGLWE
MKSAAIMGSAYAPPSEAQIVRALIQAYSISEELGLNKAELKEA

Specific function: Unknown

COG id: COG1657

COG function: function code I; Squalene cyclase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31704; Mature: 31704

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFYFAVDKARERGVPIKEFKLIQEDGSVYWEGKFGRSKWETSGEVIYGNMVALSGIYLG
CEEEEEEHHHHHCCCCHHHHHEEECCCCEEEECCCCCCCCCCCCCEEECHHHHHHHHHHH
LLSGEVKPKTWPEPERSRFEKGITVGLARILSLQQEDGGWGWKVVLVEGKTRFPAGKGHV
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCE
LYTAKILAKVLIPALRLNIKNVSYGGTTYDVAEHARAAVRFLIDQQLESGGYSANKEWSM
EEHHHHHHHHHHHHHHHEECEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TEDPLYTAWALRALCEAYRYRDLLGLDDATVQQVKEAIRRAVDWLLSHQEDEGDYAGLWE
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MKSAAIMGSAYAPPSEAQIVRALIQAYSISEELGLNKAELKEA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MRFYFAVDKARERGVPIKEFKLIQEDGSVYWEGKFGRSKWETSGEVIYGNMVALSGIYLG
CEEEEEEHHHHHCCCCHHHHHEEECCCCEEEECCCCCCCCCCCCCEEECHHHHHHHHHHH
LLSGEVKPKTWPEPERSRFEKGITVGLARILSLQQEDGGWGWKVVLVEGKTRFPAGKGHV
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCE
LYTAKILAKVLIPALRLNIKNVSYGGTTYDVAEHARAAVRFLIDQQLESGGYSANKEWSM
EEHHHHHHHHHHHHHHHEECEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TEDPLYTAWALRALCEAYRYRDLLGLDDATVQQVKEAIRRAVDWLLSHQEDEGDYAGLWE
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MKSAAIMGSAYAPPSEAQIVRALIQAYSISEELGLNKAELKEA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA