| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is TrkG [C]
Identifier: 20094446
GI number: 20094446
Start: 969971
End: 971443
Strand: Direct
Name: TrkG [C]
Synonym: MK1010
Alternate gene names: 20094446
Gene position: 969971-971443 (Clockwise)
Preceding gene: 20094445
Following gene: 20094447
Centisome position: 57.23
GC content: 60.76
Gene sequence:
>1473_bases GTGGACGTGAAGCTGGTGAGCAGTATCCTAGGAACCGTCGTGAAGGTCGCCGCCGTGCTCCCGCTACTCCCCCTCCCGAT TTCGCTACTTTACGGGGAATTAGACTGCATCGCTCCTCTCCTCTTGACTTCCCTCATCATGCTCGTCTGCGGGGTCGCCC TCGAGCGGATCGCGAGGGTTGAGCGCCACGTTCGTCCGAGACATGCGATAGTTGCCGTGCCCATAATTTGGCTCGTGATC CCACTCTTCACGTCGCTTCCTTACCGTTTTTGCGAACACATGTCGTGGCTGGACGCTTACTTCGAAAGCATGTCTGGATG GACTACGACAGGTCTCACCGTGCTCCCGGACATCGACCACGCGCACCGCACCATCCTGTTCTGGAGAAGCCTCGAGCAGT GGGTAGGAGGCCTGGGTATCGTCGTGTCGATTATCAGCATCCTCAGGTTCGAAACACCGAGCCTTCTGTACGTCGCCGAG GCCCGCGAGGAACGGATCAGACCGAACGTCGTTAACACAGCGAAAGAGATGTGGAAGATCTACATCACGATCACCGCGGT GGGTTTCCTAGCCCTGTGGGCCGCGGGGATGAATCCCTTCGACGCGCTGAACCACTCCATGACCGCGGTTGCCACCGGAG GGTTCTCCACGCGGTCCGAGAGCGTCACCGCGTGGCACTCACCGACCGTTGAACTCATCACGGTCGTCCTCATGGTGCTC GGTGCCACCAGCTTCGTCACTCACTACAGGGTGGCCAAGACCTTCCGTACGTCTCCCGCCGAACTTCCGAAGCGGATCAT CAAGGCACTTCGACAGTACCTCCAAGATCGTCAGTTCCTCACCATGATCGGTCTCACCGCCGCCGTCACCGCGTATGCGG GCGCGGTATCCGGCGACCGAGCGTGGGACGTCGTCCGGTACTACGGGTACCAGGCGGTGTCCGCCATCACCTGCTGTGGA TTCTCCAACGCGGACGTTCTCTCCTTCCCCGAGTACGCCAAGCTGGCTATAACCATCCTCATGATAGTCGGAGGATCCAC GGCCTCTACGGCGGGAGCCATTAAGGTCTTGCGTTTCCTGATCATGGCGGAGGCCGTGAAGGCGGCCATCGCACGTAGGA CTCAACCTATCCGAGGCGTGGTCGTCCCTCGCATCGGCAGTAGGGTACTCTCCGAGGATGAGATCTCCGACGCGTTCGCG ATCGCCTCGGCGTACATGTTCTTCCTGCTCATAGGCACGCTGCTGCTCACGGCGTACGGATACCCGCTGGTCGACGCCCT GTTCGAGGTCGCGTCGGCACAGGGCGGCGTCGGGCTGTCCTCGGGGATCACGGCGCCCAACGCGCCGGCGTTCGTGAAAA TCCTGCTTATCTTCCACATGTGGATAGGCAGGCTGGAGGTTCTGCCGTGCCTAGCGGCCCTCTACTGGCTGACCTTGATC CTGAAGAGGCTCGCCGTCAAAGGTAGGGACTGA
Upstream 100 bases:
>100_bases GGAGCGTTTTACGGTGTCGTCATCACCAGACCGGTGTACGCAGACCTGCTGAAGAAGATACTCGGAACGGAGTAGGGGGG AGGTAGAAACGGACCCGATC
Downstream 100 bases:
>100_bases TCCCCTCGCCCTCCAGGGTGGGGTTCTCCGGGGGTCGTGAGGGGCATGTACGTGGTGGTCGTGGGGGGCGGACGCGTCGG TAGGATACTGGCCGAGTTGC
Product: potassium transporter
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MDVKLVSSILGTVVKVAAVLPLLPLPISLLYGELDCIAPLLLTSLIMLVCGVALERIARVERHVRPRHAIVAVPIIWLVI PLFTSLPYRFCEHMSWLDAYFESMSGWTTTGLTVLPDIDHAHRTILFWRSLEQWVGGLGIVVSIISILRFETPSLLYVAE AREERIRPNVVNTAKEMWKIYITITAVGFLALWAAGMNPFDALNHSMTAVATGGFSTRSESVTAWHSPTVELITVVLMVL GATSFVTHYRVAKTFRTSPAELPKRIIKALRQYLQDRQFLTMIGLTAAVTAYAGAVSGDRAWDVVRYYGYQAVSAITCCG FSNADVLSFPEYAKLAITILMIVGGSTASTAGAIKVLRFLIMAEAVKAAIARRTQPIRGVVVPRIGSRVLSEDEISDAFA IASAYMFFLLIGTLLLTAYGYPLVDALFEVASAQGGVGLSSGITAPNAPAFVKILLIFHMWIGRLEVLPCLAALYWLTLI LKRLAVKGRD
Sequences:
>Translated_490_residues MDVKLVSSILGTVVKVAAVLPLLPLPISLLYGELDCIAPLLLTSLIMLVCGVALERIARVERHVRPRHAIVAVPIIWLVI PLFTSLPYRFCEHMSWLDAYFESMSGWTTTGLTVLPDIDHAHRTILFWRSLEQWVGGLGIVVSIISILRFETPSLLYVAE AREERIRPNVVNTAKEMWKIYITITAVGFLALWAAGMNPFDALNHSMTAVATGGFSTRSESVTAWHSPTVELITVVLMVL GATSFVTHYRVAKTFRTSPAELPKRIIKALRQYLQDRQFLTMIGLTAAVTAYAGAVSGDRAWDVVRYYGYQAVSAITCCG FSNADVLSFPEYAKLAITILMIVGGSTASTAGAIKVLRFLIMAEAVKAAIARRTQPIRGVVVPRIGSRVLSEDEISDAFA IASAYMFFLLIGTLLLTAYGYPLVDALFEVASAQGGVGLSSGITAPNAPAFVKILLIFHMWIGRLEVLPCLAALYWLTLI LKRLAVKGRD >Mature_490_residues MDVKLVSSILGTVVKVAAVLPLLPLPISLLYGELDCIAPLLLTSLIMLVCGVALERIARVERHVRPRHAIVAVPIIWLVI PLFTSLPYRFCEHMSWLDAYFESMSGWTTTGLTVLPDIDHAHRTILFWRSLEQWVGGLGIVVSIISILRFETPSLLYVAE AREERIRPNVVNTAKEMWKIYITITAVGFLALWAAGMNPFDALNHSMTAVATGGFSTRSESVTAWHSPTVELITVVLMVL GATSFVTHYRVAKTFRTSPAELPKRIIKALRQYLQDRQFLTMIGLTAAVTAYAGAVSGDRAWDVVRYYGYQAVSAITCCG FSNADVLSFPEYAKLAITILMIVGGSTASTAGAIKVLRFLIMAEAVKAAIARRTQPIRGVVVPRIGSRVLSEDEISDAFA IASAYMFFLLIGTLLLTAYGYPLVDALFEVASAQGGVGLSSGITAPNAPAFVKILLIFHMWIGRLEVLPCLAALYWLTLI LKRLAVKGRD
Specific function: Low-Affinity Potassium Transport System. Interacts With Trk System Potassium Uptake Protein Trka. Trke Increases The Affinity Of The System. [C]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=500, Percent_Identity=25.8, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI48994987, Length=492, Percent_Identity=28.6585365853659, Blast_Score=157, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 53632; Mature: 53632
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKLVSSILGTVVKVAAVLPLLPLPISLLYGELDCIAPLLLTSLIMLVCGVALERIARV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERHVRPRHAIVAVPIIWLVIPLFTSLPYRFCEHMSWLDAYFESMSGWTTTGLTVLPDIDH HHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCH AHRTILFWRSLEQWVGGLGIVVSIISILRFETPSLLYVAEAREERIRPNVVNTAKEMWKI HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHH YITITAVGFLALWAAGMNPFDALNHSMTAVATGGFSTRSESVTAWHSPTVELITVVLMVL HHHHHHHHHHHHHHCCCCHHHHHCCCHHHEEECCCCCCCCCEEECCCCHHHHHHHHHHHH GATSFVTHYRVAKTFRTSPAELPKRIIKALRQYLQDRQFLTMIGLTAAVTAYAGAVSGDR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCH AWDVVRYYGYQAVSAITCCGFSNADVLSFPEYAKLAITILMIVGGSTASTAGAIKVLRFL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IMAEAVKAAIARRTQPIRGVVVPRIGSRVLSEDEISDAFAIASAYMFFLLIGTLLLTAYG HHHHHHHHHHHHCCCCCCCEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YPLVDALFEVASAQGGVGLSSGITAPNAPAFVKILLIFHMWIGRLEVLPCLAALYWLTLI HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRLAVKGRD HHHHHCCCCC >Mature Secondary Structure MDVKLVSSILGTVVKVAAVLPLLPLPISLLYGELDCIAPLLLTSLIMLVCGVALERIARV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERHVRPRHAIVAVPIIWLVIPLFTSLPYRFCEHMSWLDAYFESMSGWTTTGLTVLPDIDH HHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCH AHRTILFWRSLEQWVGGLGIVVSIISILRFETPSLLYVAEAREERIRPNVVNTAKEMWKI HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHH YITITAVGFLALWAAGMNPFDALNHSMTAVATGGFSTRSESVTAWHSPTVELITVVLMVL HHHHHHHHHHHHHHCCCCHHHHHCCCHHHEEECCCCCCCCCEEECCCCHHHHHHHHHHHH GATSFVTHYRVAKTFRTSPAELPKRIIKALRQYLQDRQFLTMIGLTAAVTAYAGAVSGDR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCH AWDVVRYYGYQAVSAITCCGFSNADVLSFPEYAKLAITILMIVGGSTASTAGAIKVLRFL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IMAEAVKAAIARRTQPIRGVVVPRIGSRVLSEDEISDAFAIASAYMFFLLIGTLLLTAYG HHHHHHHHHHHHCCCCCCCEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YPLVDALFEVASAQGGVGLSSGITAPNAPAFVKILLIFHMWIGRLEVLPCLAALYWLTLI HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRLAVKGRD HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]