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The map label for this gene is SecF [C]

Identifier: 20094444

GI number: 20094444

Start: 967906

End: 968730

Strand: Direct

Name: SecF [C]

Synonym: MK1008

Alternate gene names: 20094444

Gene position: 967906-968730 (Clockwise)

Preceding gene: 20094442

Following gene: 20094445

Centisome position: 57.1

GC content: 59.64

Gene sequence:

>825_bases
GTGGGGTTGTTCGAGAAGTACGTCTCCAACTTGAACCGCCTTCTGATCCTCACGATGGTGTTCGCTGTGATCTGCGCAGG
ATCCACCCTCGCCTTAGGGGTCAAAAAGGGCATTGATCTCAAAGGAGGTACCATGGTGATCCTGAAAACGGAGAAGGATC
CCGATACGGTAACTAGCGAGGCTTCGAGGATCCTCGGCGTGTCCGACGTGGAGGCTATACGTTCCTCCCAAGGCGACGTG
ATCGTGCAGGTTCCTAAGTATCTGTCGGCAGATGACGTGAATAAACTCGCACGGGCCGTCGGAGGGGAGGTCGAGTCCGT
CCAGACCATCGGACCGGCACTGGGCCGCGTGTTCTGGGAGAGCGTCAAAGTAGCCGTACCACTGGCGCTGGTCGCGGTCT
CCATCGTCGTGTTCGCCATATTCCGGAAACCGCTGCTGAGTGCCGCCGTGCTGGGAGCGCTGGCCTTGGACCTCGTCGAC
GCGCTCGGACTGATGGCACTCACGGGCGTACCGCTGACCCTGGCGAGCTTCGCGGGCCTCCTTATGATCATAGGTTACGC
GGTCGACAGCAACATACTCCTCTCCATGTACACCGTGAAGCGTCGCAGGGTCAGGAGGGTCGATCGGGCGATCGCGGACT
CGTTTAAGACGGGTATCACCATGGTAGCCACGACCACCGCGGCCGCATGCGCGCTGTTCTTGCTATCCATGTCGGAAGCC
ATGTTCGAAATCGCCGCCGTCGTGATCTTCGGGCTAATCGCGGACGTCCTTAACACGTGGATCTTCAACGCTTGGGTCAT
CCGCGAGAAGATCGCGGGGAGGTGA

Upstream 100 bases:

>100_bases
TAGCCAGTGCTGTCAGAACTATGCCCACGAACGTTATCAGCACACCGGCCTTGAGGACGTCCTCGACTCGCAGGGCTATC
ACCCCTCGGGGGGCGCGAGT

Downstream 100 bases:

>100_bases
TCTTTGTCCGGGCTGGGATGGATGAAAGAGAACTGGAGACTACTCGTGATAACCGCCGTGTGGATCGTAGCAGCGACGTC
TCTCGCGGTGAAGGGAGTGA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MGLFEKYVSNLNRLLILTMVFAVICAGSTLALGVKKGIDLKGGTMVILKTEKDPDTVTSEASRILGVSDVEAIRSSQGDV
IVQVPKYLSADDVNKLARAVGGEVESVQTIGPALGRVFWESVKVAVPLALVAVSIVVFAIFRKPLLSAAVLGALALDLVD
ALGLMALTGVPLTLASFAGLLMIIGYAVDSNILLSMYTVKRRRVRRVDRAIADSFKTGITMVATTTAAACALFLLSMSEA
MFEIAAVVIFGLIADVLNTWIFNAWVIREKIAGR

Sequences:

>Translated_274_residues
MGLFEKYVSNLNRLLILTMVFAVICAGSTLALGVKKGIDLKGGTMVILKTEKDPDTVTSEASRILGVSDVEAIRSSQGDV
IVQVPKYLSADDVNKLARAVGGEVESVQTIGPALGRVFWESVKVAVPLALVAVSIVVFAIFRKPLLSAAVLGALALDLVD
ALGLMALTGVPLTLASFAGLLMIIGYAVDSNILLSMYTVKRRRVRRVDRAIADSFKTGITMVATTTAAACALFLLSMSEA
MFEIAAVVIFGLIADVLNTWIFNAWVIREKIAGR
>Mature_273_residues
GLFEKYVSNLNRLLILTMVFAVICAGSTLALGVKKGIDLKGGTMVILKTEKDPDTVTSEASRILGVSDVEAIRSSQGDVI
VQVPKYLSADDVNKLARAVGGEVESVQTIGPALGRVFWESVKVAVPLALVAVSIVVFAIFRKPLLSAAVLGALALDLVDA
LGLMALTGVPLTLASFAGLLMIIGYAVDSNILLSMYTVKRRRVRRVDRAIADSFKTGITMVATTTAAACALFLLSMSEAM
FEIAAVVIFGLIADVLNTWIFNAWVIREKIAGR

Specific function: Involved In Protein Export. [C]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813 [H]

Pfam domain/function: PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 29148; Mature: 29017

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFEKYVSNLNRLLILTMVFAVICAGSTLALGVKKGIDLKGGTMVILKTEKDPDTVTSE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHH
ASRILGVSDVEAIRSSQGDVIVQVPKYLSADDVNKLARAVGGEVESVQTIGPALGRVFWE
HHHHCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SVKVAVPLALVAVSIVVFAIFRKPLLSAAVLGALALDLVDALGLMALTGVPLTLASFAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LMIIGYAVDSNILLSMYTVKRRRVRRVDRAIADSFKTGITMVATTTAAACALFLLSMSEA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MFEIAAVVIFGLIADVLNTWIFNAWVIREKIAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLFEKYVSNLNRLLILTMVFAVICAGSTLALGVKKGIDLKGGTMVILKTEKDPDTVTSE
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHH
ASRILGVSDVEAIRSSQGDVIVQVPKYLSADDVNKLARAVGGEVESVQTIGPALGRVFWE
HHHHCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SVKVAVPLALVAVSIVVFAIFRKPLLSAAVLGALALDLVDALGLMALTGVPLTLASFAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LMIIGYAVDSNILLSMYTVKRRRVRRVDRAIADSFKTGITMVATTTAAACALFLLSMSEA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MFEIAAVVIFGLIADVLNTWIFNAWVIREKIAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]