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The map label for this gene is 20094419

Identifier: 20094419

GI number: 20094419

Start: 944171

End: 944794

Strand: Direct

Name: 20094419

Synonym: MK0983

Alternate gene names: NA

Gene position: 944171-944794 (Clockwise)

Preceding gene: 20094418

Following gene: 20094420

Centisome position: 55.7

GC content: 60.58

Gene sequence:

>624_bases
TTGACGAAGCCCGTCGAGCCGGACGATCCCAGGATACGACTGCTTCTGGCGTACGTGAACCGAGTGAAGGACCGAGCCGC
TTCCGGCGGTTACAGCGGTGTCAATCGACGACAGCTCACGGAGGTTCTGCAGTCCATAGAGTCGACGCTCCAGGAGCTCA
GGTACTCGTATTTGCCGCCGGAAAACGTCTCGGAAAGACTGAAGGACTTACTGCCAGACCTGGAGGACGTCGTCGATCCG
GAGGAACCCGAGCTCAGGTGGCTCGTTGAGTACTTGGAACACGCCGACGAAGTCTTCGAGCGCGAGATAGGGGACGAGGC
CGACGCCGTACTGTGCGTGGTCGGCGAAGTCGGAAGCGTCCGAGAGCATCCGAACGCGGACAACCTCTACATCACGGTGG
TAAACACGGGCCGGTTCGGCAAGCGTACCGTCGTTACGAACCTCACCGACGTGGAGGAGGGCGACTCGATGGCCGTCGCT
CTACTCCCGCCTAGGGAGTTCTCCGGAGTCGTCAGTGAGGGGATGTTCTGCGGGGAAGCCGACGGAGAGCCGGGGGAAAT
CATAGAACCACCCGAGCGCGGTGAGGTACGGAGTATCGTACTGGAATGGATAGAAGGGGTGTAA

Upstream 100 bases:

>100_bases
CGAAGGTCGGCCGGGAGAGCCGGTCATCGAACTCCTTCGGGAGCTCGGAAGGCGTAACCCGAAGGCGGCCGAGAAGCTGT
CCGAGCTCGGGGTGTAAGCC

Downstream 100 bases:

>100_bases
GGACTATGGTTAGCGCTGACGATCTCACGTACCGCGAGAAGCTGGTACTACTGGCGCTATACGAGGAGTTCGACGGCGGT
CCCGCCGGAGTGAAGAAGCT

Product: RNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTKPVEPDDPRIRLLLAYVNRVKDRAASGGYSGVNRRQLTEVLQSIESTLQELRYSYLPPENVSERLKDLLPDLEDVVDP
EEPELRWLVEYLEHADEVFEREIGDEADAVLCVVGEVGSVREHPNADNLYITVVNTGRFGKRTVVTNLTDVEEGDSMAVA
LLPPREFSGVVSEGMFCGEADGEPGEIIEPPERGEVRSIVLEWIEGV

Sequences:

>Translated_207_residues
MTKPVEPDDPRIRLLLAYVNRVKDRAASGGYSGVNRRQLTEVLQSIESTLQELRYSYLPPENVSERLKDLLPDLEDVVDP
EEPELRWLVEYLEHADEVFEREIGDEADAVLCVVGEVGSVREHPNADNLYITVVNTGRFGKRTVVTNLTDVEEGDSMAVA
LLPPREFSGVVSEGMFCGEADGEPGEIIEPPERGEVRSIVLEWIEGV
>Mature_206_residues
TKPVEPDDPRIRLLLAYVNRVKDRAASGGYSGVNRRQLTEVLQSIESTLQELRYSYLPPENVSERLKDLLPDLEDVVDPE
EPELRWLVEYLEHADEVFEREIGDEADAVLCVVGEVGSVREHPNADNLYITVVNTGRFGKRTVVTNLTDVEEGDSMAVAL
LPPREFSGVVSEGMFCGEADGEPGEIIEPPERGEVRSIVLEWIEGV

Specific function: Unknown

COG id: COG2517

COG function: function code R; Predicted RNA-binding protein containing a C-terminal EMAP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23121; Mature: 22990

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPVEPDDPRIRLLLAYVNRVKDRAASGGYSGVNRRQLTEVLQSIESTLQELRYSYLPP
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ENVSERLKDLLPDLEDVVDPEEPELRWLVEYLEHADEVFEREIGDEADAVLCVVGEVGSV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
REHPNADNLYITVVNTGRFGKRTVVTNLTDVEEGDSMAVALLPPREFSGVVSEGMFCGEA
CCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCC
DGEPGEIIEPPERGEVRSIVLEWIEGV
CCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKPVEPDDPRIRLLLAYVNRVKDRAASGGYSGVNRRQLTEVLQSIESTLQELRYSYLPP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ENVSERLKDLLPDLEDVVDPEEPELRWLVEYLEHADEVFEREIGDEADAVLCVVGEVGSV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
REHPNADNLYITVVNTGRFGKRTVVTNLTDVEEGDSMAVALLPPREFSGVVSEGMFCGEA
CCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCC
DGEPGEIIEPPERGEVRSIVLEWIEGV
CCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA