| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094402
Identifier: 20094402
GI number: 20094402
Start: 926988
End: 927662
Strand: Direct
Name: 20094402
Synonym: MK0966
Alternate gene names: NA
Gene position: 926988-927662 (Clockwise)
Preceding gene: 20094401
Following gene: 20094403
Centisome position: 54.69
GC content: 60.74
Gene sequence:
>675_bases GTGAACGGGTGGTTGAACATGAGTGAAGAACTCTCTCGCAGGTATCCTGCCGTCCGTGTCCCGGCCGGCGAACTGGCGCA TTCCGAACCCACGGAGGATGGTTTCGTCACGCCTAGAGGTGTCAGGTTTCACAGGGCTCTGGTAGTCGGGGTGCTCTCGG GACGGTACGTGGACGAGGAGCGGGAGTTCGCAGTGATCACGGTCACCGACGACACGGGTTCCGTCGACGTGTTCGCGTTC GATGAATGCTACGAGCCCGCCCGGACGCTCGATAAGTGGAGGCAGATCAAGGTGATCGGTCGTCCGATGGAGCCACGTGA AGAGGGTCGTCCCGTGGCGCTCAGGGCCGAGGTAATCCGCCTTACGTCGTACTCCGAGGAGCTCTTCCGCAGGTTGGAGT ACGAGCTGATGGCCGGGGGCGAGGTACCTACCGTCGAAAAACCCCCGACGCTCGACGAGGCGATCGAGATGGTGTATAAG GAACTGCTCGAGAGGGAGGAGGAAACGTTCTCGAGGGAGGAACTGTACGAGGTCATCCGCTCCGTCGTCCCCCTCGCGGA CGAGGAGTTCTGCGAGAAGATCATTAAAGAGATGGAGGAGCGCGAGCTCCTGTACCCGATGGATCTGCCCGGAGGGAAAC GTTGGTCCGTGATAGAAACCGGCTGGGGGTTGTAA
Upstream 100 bases:
>100_bases TTAAACACCGCGTGAGCCGTGAGCGGGTCGAGGAGATCCTGGACGACCTCGTCGAGGAGGGCTCCCTTCTCCAGCCGCGG CCCGGAGTGTACCTCCCGAT
Downstream 100 bases:
>100_bases ACCGTGGTCGAGTACGACTACGAGGAACTCCTCGAGCGCGCTTACGAGCAGCTTCCCGAGGAGGTGCTCGAAGATCGCCG GTTCGAGATGCCCAAGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNGWLNMSEELSRRYPAVRVPAGELAHSEPTEDGFVTPRGVRFHRALVVGVLSGRYVDEEREFAVITVTDDTGSVDVFAF DECYEPARTLDKWRQIKVIGRPMEPREEGRPVALRAEVIRLTSYSEELFRRLEYELMAGGEVPTVEKPPTLDEAIEMVYK ELLEREEETFSREELYEVIRSVVPLADEEFCEKIIKEMEERELLYPMDLPGGKRWSVIETGWGL
Sequences:
>Translated_224_residues MNGWLNMSEELSRRYPAVRVPAGELAHSEPTEDGFVTPRGVRFHRALVVGVLSGRYVDEEREFAVITVTDDTGSVDVFAF DECYEPARTLDKWRQIKVIGRPMEPREEGRPVALRAEVIRLTSYSEELFRRLEYELMAGGEVPTVEKPPTLDEAIEMVYK ELLEREEETFSREELYEVIRSVVPLADEEFCEKIIKEMEERELLYPMDLPGGKRWSVIETGWGL >Mature_224_residues MNGWLNMSEELSRRYPAVRVPAGELAHSEPTEDGFVTPRGVRFHRALVVGVLSGRYVDEEREFAVITVTDDTGSVDVFAF DECYEPARTLDKWRQIKVIGRPMEPREEGRPVALRAEVIRLTSYSEELFRRLEYELMAGGEVPTVEKPPTLDEAIEMVYK ELLEREEETFSREELYEVIRSVVPLADEEFCEKIIKEMEERELLYPMDLPGGKRWSVIETGWGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25906; Mature: 25906
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGWLNMSEELSRRYPAVRVPAGELAHSEPTEDGFVTPRGVRFHRALVVGVLSGRYVDEE CCCCCCCHHHHHHHCCEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCC REFAVITVTDDTGSVDVFAFDECYEPARTLDKWRQIKVIGRPMEPREEGRPVALRAEVIR CCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCEEEHHHHHH LTSYSEELFRRLEYELMAGGEVPTVEKPPTLDEAIEMVYKELLEREEETFSREELYEVIR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SVVPLADEEFCEKIIKEMEERELLYPMDLPGGKRWSVIETGWGL HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MNGWLNMSEELSRRYPAVRVPAGELAHSEPTEDGFVTPRGVRFHRALVVGVLSGRYVDEE CCCCCCCHHHHHHHCCEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCC REFAVITVTDDTGSVDVFAFDECYEPARTLDKWRQIKVIGRPMEPREEGRPVALRAEVIR CCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCEEEHHHHHH LTSYSEELFRRLEYELMAGGEVPTVEKPPTLDEAIEMVYKELLEREEETFSREELYEVIR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SVVPLADEEFCEKIIKEMEERELLYPMDLPGGKRWSVIETGWGL HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA