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The map label for this gene is SpeE

Identifier: 20094397

GI number: 20094397

Start: 922744

End: 923442

Strand: Reverse

Name: SpeE

Synonym: MK0961

Alternate gene names: NA

Gene position: 923442-922744 (Counterclockwise)

Preceding gene: 20094406

Following gene: 20094392

Centisome position: 54.48

GC content: 62.23

Gene sequence:

>699_bases
ATGGGGGTAGGAGAGGTGGTCGATAATATCGGTCGCGGGTTACTCAGTGAAGACAGGAGAGCGCGTGAGGCCGCCGCGCG
GTACCGGGAGTGGGCGGAGTCGTTGGATGAGGAGGAGCTGTTCCGATACGTGAGGGAACGGACGGGAGGATTGGGCCACG
GGAAGGAGGGGTTCGAGGTCGGGAAAATGGGGCTCAAGGGGTACGTGATCGCGTGGCCCGAGCAGGCTCGAGGCATGGTG
CTGGAGATCGGTACGGGATTGGGCAGAACCACCTGGGCGCTGTTGAGGTGGGGTGACCCGGAACTGATCGTTTCGGTGGA
AGTGGATCCTCGAATGCTCGCGATCGCGTTGTACCGGAACCCGGTCCCGGAGTTCTCCGAAGCGCTCAGGGACGACAGGG
TCAAGATACTACTGGGCGACGCCGTGGAAGTCGTGCCGAAACTCCCGAGAGGTTTCGATCATGTGGTTCACGACGGGGGA
CCGTGTCCTGGGCGCAACCCACGGCTGTTCTCTCCCGAGTTCCTAAGGACGATAGCCGAGAAGCTGAAGGACGAGGGTAC
GGCGTCGGTGTTCGCGGGTCGAGATCCGCGGTGGCAGGATAGGATATACCGAGCCCTCAGTCGGCTCTTTCTGGAGGTGA
GAGCGGAATCTTTCCCGGACACCCCGACCGTGGTGTTCCGATGTGAGGGACGCCGTTAG

Upstream 100 bases:

>100_bases
AGCACCTCCAGCGCCTCCTCGTCGGTGTCACATCGGGCCAAGTAATCCCTCACCGAAGGCTCGTAGCCGCGAAGGGGGTC
TTCCGGCAAGAGCGGTCCCC

Downstream 100 bases:

>100_bases
CCGTCGGAATCCAGCCTTTCCCTGAGGAGTCGCATGGTGACCTCCGGGTCGGCCTGTCCCCTGGTTTTGCGCATCACCTG
GCCCATCAGGTAGTGGATGG

Product: spermidine synthase

Products: 5'-methylthioadenosine; spermidine

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MGVGEVVDNIGRGLLSEDRRAREAAARYREWAESLDEEELFRYVRERTGGLGHGKEGFEVGKMGLKGYVIAWPEQARGMV
LEIGTGLGRTTWALLRWGDPELIVSVEVDPRMLAIALYRNPVPEFSEALRDDRVKILLGDAVEVVPKLPRGFDHVVHDGG
PCPGRNPRLFSPEFLRTIAEKLKDEGTASVFAGRDPRWQDRIYRALSRLFLEVRAESFPDTPTVVFRCEGRR

Sequences:

>Translated_232_residues
MGVGEVVDNIGRGLLSEDRRAREAAARYREWAESLDEEELFRYVRERTGGLGHGKEGFEVGKMGLKGYVIAWPEQARGMV
LEIGTGLGRTTWALLRWGDPELIVSVEVDPRMLAIALYRNPVPEFSEALRDDRVKILLGDAVEVVPKLPRGFDHVVHDGG
PCPGRNPRLFSPEFLRTIAEKLKDEGTASVFAGRDPRWQDRIYRALSRLFLEVRAESFPDTPTVVFRCEGRR
>Mature_231_residues
GVGEVVDNIGRGLLSEDRRAREAAARYREWAESLDEEELFRYVRERTGGLGHGKEGFEVGKMGLKGYVIAWPEQARGMVL
EIGTGLGRTTWALLRWGDPELIVSVEVDPRMLAIALYRNPVPEFSEALRDDRVKILLGDAVEVVPKLPRGFDHVVHDGGP
CPGRNPRLFSPEFLRTIAEKLKDEGTASVFAGRDPRWQDRIYRALSRLFLEVRAESFPDTPTVVFRCEGRR

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.16

Molecular weight: Translated: 26204; Mature: 26073

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVGEVVDNIGRGLLSEDRRAREAAARYREWAESLDEEELFRYVRERTGGLGHGKEGFEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHH
GKMGLKGYVIAWPEQARGMVLEIGTGLGRTTWALLRWGDPELIVSVEVDPRMLAIALYRN
HCCCCCEEEEECCCCCCCEEEEECCCCCHHHEEEEEECCCCEEEEEECCCHHEEHHHHCC
PVPEFSEALRDDRVKILLGDAVEVVPKLPRGFDHVVHDGGPCPGRNPRLFSPEFLRTIAE
CCHHHHHHHHCCCEEEEECCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
KLKDEGTASVFAGRDPRWQDRIYRALSRLFLEVRAESFPDTPTVVFRCEGRR
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure 
GVGEVVDNIGRGLLSEDRRAREAAARYREWAESLDEEELFRYVRERTGGLGHGKEGFEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHH
GKMGLKGYVIAWPEQARGMVLEIGTGLGRTTWALLRWGDPELIVSVEVDPRMLAIALYRN
HCCCCCEEEEECCCCCCCEEEEECCCCCHHHEEEEEECCCCEEEEEECCCHHEEHHHHCC
PVPEFSEALRDDRVKILLGDAVEVVPKLPRGFDHVVHDGGPCPGRNPRLFSPEFLRTIAE
CCHHHHHHHHCCCEEEEECCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
KLKDEGTASVFAGRDPRWQDRIYRALSRLFLEVRAESFPDTPTVVFRCEGRR
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-adenosylmethioninamine; putrescine

Specific reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA