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The map label for this gene is RpmC

Identifier: 20094279

GI number: 20094279

Start: 802379

End: 802612

Strand: Direct

Name: RpmC

Synonym: MK0843

Alternate gene names: 20094279

Gene position: 802379-802612 (Clockwise)

Preceding gene: 20094278

Following gene: 20094280

Centisome position: 47.34

GC content: 49.57

Gene sequence:

>234_bases
TTGGGTAAGTTCAAGCTAAGACCGGACGAGATCAGGGAAATGACGCCCGAGGAGCGACGGGAGAAACTCAAAGAGCTCAA
GGCGGAGCTACTTCGAGAGATGACTTCGAAATCGATCTCAGGGGTCCCGGACAATCCTGGCAGGGTAAAAGAAATAAAGA
AGAACATCGCAAGGATATTGACGACAGAAAGAGAAGAAGAGCTGCGTAAGATCCGTGAGACGGAAAAGGGTTAG

Upstream 100 bases:

>100_bases
ACTGCCGGACGAGCTGGAGATCAGGCCACCGGAGGAGGTCGAGGACGAGCTGAAGGAACTCATCGGTAAGTCAGAGGACG
AGGCCGAGGGGGCGTAAGTG

Downstream 100 bases:

>100_bases
AGGGGAACTCGGAGTAGAGATGCAGGAAGACGACATCTGCCCGGTTTGCGGTCTTCCCAAGGAACTTTGCGTATGTGAGG
AAGTTTCCAAGGAGACAGTT

Product: ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MGKFKLRPDEIREMTPEERREKLKELKAELLREMTSKSISGVPDNPGRVKEIKKNIARILTTEREEELRKIRETEKG

Sequences:

>Translated_77_residues
MGKFKLRPDEIREMTPEERREKLKELKAELLREMTSKSISGVPDNPGRVKEIKKNIARILTTEREEELRKIRETEKG
>Mature_76_residues
GKFKLRPDEIREMTPEERREKLKELKAELLREMTSKSISGVPDNPGRVKEIKKNIARILTTEREEELRKIRETEKG

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_METKA (Q8TX34)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614126.1
- ProteinModelPortal:   Q8TX34
- SMR:   Q8TX34
- GeneID:   1476944
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0843
- NMPDR:   fig|190192.1.peg.839
- HOGENOM:   HBG730819
- OMA:   FVENPGR
- BioCyc:   MKAN190192:MK0843-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_A
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 9121; Mature: 8990

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFKLRPDEIREMTPEERREKLKELKAELLREMTSKSISGVPDNPGRVKEIKKNIARIL
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TTEREEELRKIRETEKG
HCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKFKLRPDEIREMTPEERREKLKELKAELLREMTSKSISGVPDNPGRVKEIKKNIARIL
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TTEREEELRKIRETEKG
HCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014