Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094171

Identifier: 20094171

GI number: 20094171

Start: 700084

End: 700260

Strand: Direct

Name: 20094171

Synonym: MK0734

Alternate gene names: NA

Gene position: 700084-700260 (Clockwise)

Preceding gene: 20094170

Following gene: 20094177

Centisome position: 41.3

GC content: 58.76

Gene sequence:

>177_bases
ATGTGTGAGTTCACTGTCAAACTAGGTGGTGAGGTGATCGCGGAGGACGTCCTGTACCTGGAAGTGACGGAGGAGGGTGT
CGTACTGCGCGACGTGATGGGGGAGGAACAGGTGATCGAAGGTGCCCAAGTCAAGCGCATCGACATGGACGAGCACGTGG
TGGAGCTCGAGCGCTGA

Upstream 100 bases:

>100_bases
CAGGATCCACAAGCCGACGTCGAGCTCCCTGTATCCTGCAGCTCCTTCCCGGAAATCATTTCAGGAATTTCCGAAATTCA
GTGTGAACGGGGACTGAGAG

Downstream 100 bases:

>100_bases
CCCCCAGTTCAGGTCCCGACCCCGGGCACCGAGGATCGTTATGGACACCATAACGGTCATGAGTGGGGCTCGGCGCTCAT
GGGACTCGTCACCGTTCGGC

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER

Sequences:

>Translated_58_residues
MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER
>Mature_58_residues
MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER

Specific function: Unknown

COG id: COG1532

COG function: function code R; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6579; Mature: 6579

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER
CCEEEEECCCCEEECCEEEEEECCCCEEEEHHCCCHHHCCCCEEEEECCCCCEEEECC
>Mature Secondary Structure
MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER
CCEEEEECCCCEEECCEEEEEECCCCEEEEHHCCCHHHCCCCEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA