| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094171
Identifier: 20094171
GI number: 20094171
Start: 700084
End: 700260
Strand: Direct
Name: 20094171
Synonym: MK0734
Alternate gene names: NA
Gene position: 700084-700260 (Clockwise)
Preceding gene: 20094170
Following gene: 20094177
Centisome position: 41.3
GC content: 58.76
Gene sequence:
>177_bases ATGTGTGAGTTCACTGTCAAACTAGGTGGTGAGGTGATCGCGGAGGACGTCCTGTACCTGGAAGTGACGGAGGAGGGTGT CGTACTGCGCGACGTGATGGGGGAGGAACAGGTGATCGAAGGTGCCCAAGTCAAGCGCATCGACATGGACGAGCACGTGG TGGAGCTCGAGCGCTGA
Upstream 100 bases:
>100_bases CAGGATCCACAAGCCGACGTCGAGCTCCCTGTATCCTGCAGCTCCTTCCCGGAAATCATTTCAGGAATTTCCGAAATTCA GTGTGAACGGGGACTGAGAG
Downstream 100 bases:
>100_bases CCCCCAGTTCAGGTCCCGACCCCGGGCACCGAGGATCGTTATGGACACCATAACGGTCATGAGTGGGGCTCGGCGCTCAT GGGACTCGTCACCGTTCGGC
Product: RNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER
Sequences:
>Translated_58_residues MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER >Mature_58_residues MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER
Specific function: Unknown
COG id: COG1532
COG function: function code R; Predicted RNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6579; Mature: 6579
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER CCEEEEECCCCEEECCEEEEEECCCCEEEEHHCCCHHHCCCCEEEEECCCCCEEEECC >Mature Secondary Structure MCEFTVKLGGEVIAEDVLYLEVTEEGVVLRDVMGEEQVIEGAQVKRIDMDEHVVELER CCEEEEECCCCEEECCEEEEEECCCCEEEEHHCCCHHHCCCCEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA