| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094082
Identifier: 20094082
GI number: 20094082
Start: 602534
End: 603211
Strand: Direct
Name: 20094082
Synonym: MK0644
Alternate gene names: NA
Gene position: 602534-603211 (Clockwise)
Preceding gene: 20094080
Following gene: 20094083
Centisome position: 35.55
GC content: 64.6
Gene sequence:
>678_bases TTGCGGGCCGTCGCGCTGCTGAGCGGTGGGAAGGACTCGACGCTGGCCGCGCACCTGGCGGTCGAAGAGGGTTACGAGCT GACACACGGACTCACCGTGGTGCCCTCTGATCCGGAGAGCATGATGTTCCACGTGCCGAACGCGGACCTGGGGGCGCTAG TGGCCCAGGTGATGGGACTCGAACCCGTGAGGATACGGTCCGGACGGGACGACGAGGCGGACATCGAGGAGATAGCTCGC GTCCTCGAGGGGCTCGACGTGGACGCGCTGGTCTCCGGAGCGATCGCGTCCAGATATCAGAAGGAGCGGCTGGACAGGCT GTGTGAGGAGCTTGGGATCGAGCACGTGCACCCGCTGTGGGGGATGGACCCGTTCGAAGAGCTCGAGCTCCTAGTGGAGC GCGGTTTCGAGGTGATGATCATCGGCGTGTCGGCGGCTGGCATGGACGAGTCCTGGCTGGGCCGCAGGATCGACGAAGAC TTCATCGAGGACATCCGACGGTTGTACGAGAAGTATCGCATCCACCCCGCGGGTGAGGGGGGCGAGTACGAGACTCTCGT CCTGGACGCCCCCCTCTTCGAACGGAGGATCGTCCTCGAACGCGTCGAAAAGCGGTGGGACGGCTTTTCGGGCGAACTGA TCGTGGAGGAGGCTCGACTCATGCCCAAGCGACGATGA
Upstream 100 bases:
>100_bases TTATCAACCTGAGCGTCCTCGGGATTGACGGGTACTCCACCCCCTCACCCCCGAGGACCCCCGTTCATTCTCACGTAAAC GACTTTTCGGAGGGATAACC
Downstream 100 bases:
>100_bases TCGAACTGAGCTATGGCCGAGCGCCGCGGAGGCGCGATGAGCGGGGACACGGGGGTGAGTTCACACCCCCGAATCGAAAG CGGGTGAAACCGGAAACTGT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MRAVALLSGGKDSTLAAHLAVEEGYELTHGLTVVPSDPESMMFHVPNADLGALVAQVMGLEPVRIRSGRDDEADIEEIAR VLEGLDVDALVSGAIASRYQKERLDRLCEELGIEHVHPLWGMDPFEELELLVERGFEVMIIGVSAAGMDESWLGRRIDED FIEDIRRLYEKYRIHPAGEGGEYETLVLDAPLFERRIVLERVEKRWDGFSGELIVEEARLMPKRR
Sequences:
>Translated_225_residues MRAVALLSGGKDSTLAAHLAVEEGYELTHGLTVVPSDPESMMFHVPNADLGALVAQVMGLEPVRIRSGRDDEADIEEIAR VLEGLDVDALVSGAIASRYQKERLDRLCEELGIEHVHPLWGMDPFEELELLVERGFEVMIIGVSAAGMDESWLGRRIDED FIEDIRRLYEKYRIHPAGEGGEYETLVLDAPLFERRIVLERVEKRWDGFSGELIVEEARLMPKRR >Mature_225_residues MRAVALLSGGKDSTLAAHLAVEEGYELTHGLTVVPSDPESMMFHVPNADLGALVAQVMGLEPVRIRSGRDDEADIEEIAR VLEGLDVDALVSGAIASRYQKERLDRLCEELGIEHVHPLWGMDPFEELELLVERGFEVMIIGVSAAGMDESWLGRRIDED FIEDIRRLYEKYRIHPAGEGGEYETLVLDAPLFERRIVLERVEKRWDGFSGELIVEEARLMPKRR
Specific function: Unknown
COG id: COG2102
COG function: function code R; Predicted ATPases of PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI18087809, Length=230, Percent_Identity=30, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI86561065, Length=226, Percent_Identity=33.1858407079646, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323172, Length=234, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=4e-19, Organism=Drosophila melanogaster, GI85726382, Length=222, Percent_Identity=32.8828828828829, Blast_Score=105, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005237 - InterPro: IPR022427 - InterPro: IPR002761 - InterPro: IPR014729 [H]
Pfam domain/function: PF01902 ATP_bind_4 [H]
EC number: NA
Molecular weight: Translated: 25366; Mature: 25366
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVALLSGGKDSTLAAHLAVEEGYELTHGLTVVPSDPESMMFHVPNADLGALVAQVMGL CCEEEEECCCCCCHHHHHHHHHCCCCHHCCEEEECCCCHHEEEECCCCCHHHHHHHHHCC EPVRIRSGRDDEADIEEIARVLEGLDVDALVSGAIASRYQKERLDRLCEELGIEHVHPLW CCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GMDPFEELELLVERGFEVMIIGVSAAGMDESWLGRRIDEDFIEDIRRLYEKYRIHPAGEG CCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC GEYETLVLDAPLFERRIVLERVEKRWDGFSGELIVEEARLMPKRR CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCC >Mature Secondary Structure MRAVALLSGGKDSTLAAHLAVEEGYELTHGLTVVPSDPESMMFHVPNADLGALVAQVMGL CCEEEEECCCCCCHHHHHHHHHCCCCHHCCEEEECCCCHHEEEECCCCCHHHHHHHHHCC EPVRIRSGRDDEADIEEIARVLEGLDVDALVSGAIASRYQKERLDRLCEELGIEHVHPLW CCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GMDPFEELELLVERGFEVMIIGVSAAGMDESWLGRRIDEDFIEDIRRLYEKYRIHPAGEG CCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC GEYETLVLDAPLFERRIVLERVEKRWDGFSGELIVEEARLMPKRR CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]