| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094062
Identifier: 20094062
GI number: 20094062
Start: 583203
End: 583934
Strand: Direct
Name: 20094062
Synonym: MK0624
Alternate gene names: NA
Gene position: 583203-583934 (Clockwise)
Preceding gene: 20094061
Following gene: 20094063
Centisome position: 34.41
GC content: 62.16
Gene sequence:
>732_bases TTGACGTTCGTCACACCACGGGTCTCCCCGACGGAGTCGGACATCGAGGTCGGGTCGTGGAAGGAGATCGAGGAGATCGT ATCCTCCCTGAGCTCCGGACTAGTTCGTATCACCACCCGCGATCACGAGGACATCTACGACTGTTTCTTCATCGTCGAAG GAGGCGCCGTGGTAGGGGCCTACCTGGGACGTATCCGCGCCGAGGAGCTCTCGGCCGAAGAGGCCGTTCGGGCCATCCGC GACGTGGTGGATTCCGTCGGCTTCGCGCTCCTCGACGTGTACGAGCTCGAGCCGGAGCTCCTGGAGCTAATCAAACGCGT GAACGACGAGTGCCTGCTCAAAGAACCCTTCACACCTACCGAGGTCGAGGAAGCCGCACCCGAGGTTGAGGAGCCCGAGC GGGATGAGCTCCTGGAGAAGTTGGGTGTCGATCTCGACGCGATCTACGAATCCGTGGAGGCCGTGCTCGAGGACTACTTC GAGGAGGAGGATCCCTTCGAGGAGTTCAAGCGCATGCTCCGGGCCCTCGGGACCCAGGACGCCCGCGTGTACCTGCGCGT GAAGGTACCCGAAGGTGTCGATGAGAGGATGCTCGAGGAAGTCCGACGCGACCTCGAACACGCCCTGTCCGAGTTCTCGA TCGACGGCGTCGAGATCACCCCATCACTTAAGGAGAAGGAGACGGTCACCCTCCGCATCCGCGACATCATGAAACGCATC CGGGGCGGATAG
Upstream 100 bases:
>100_bases GAACCTCCCCTTCTAACCCACACCCGTTGAACCGAAACGGCGATAAACCCGGGTGACCCATCACCGGGCCCGCGAGAGCG GGTCGGCGTGGGCGATGTAG
Downstream 100 bases:
>100_bases CCCTTGGTGAGCGTGAACGAGAACGCCCTGCCCCTGGTGGAGCGGATGATCGAGCGCGCCGAGCTCCTGAACGTCGAGGT CCAGGAGCTCGAGAACGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTFVTPRVSPTESDIEVGSWKEIEEIVSSLSSGLVRITTRDHEDIYDCFFIVEGGAVVGAYLGRIRAEELSAEEAVRAIR DVVDSVGFALLDVYELEPELLELIKRVNDECLLKEPFTPTEVEEAAPEVEEPERDELLEKLGVDLDAIYESVEAVLEDYF EEEDPFEEFKRMLRALGTQDARVYLRVKVPEGVDERMLEEVRRDLEHALSEFSIDGVEITPSLKEKETVTLRIRDIMKRI RGG
Sequences:
>Translated_243_residues MTFVTPRVSPTESDIEVGSWKEIEEIVSSLSSGLVRITTRDHEDIYDCFFIVEGGAVVGAYLGRIRAEELSAEEAVRAIR DVVDSVGFALLDVYELEPELLELIKRVNDECLLKEPFTPTEVEEAAPEVEEPERDELLEKLGVDLDAIYESVEAVLEDYF EEEDPFEEFKRMLRALGTQDARVYLRVKVPEGVDERMLEEVRRDLEHALSEFSIDGVEITPSLKEKETVTLRIRDIMKRI RGG >Mature_242_residues TFVTPRVSPTESDIEVGSWKEIEEIVSSLSSGLVRITTRDHEDIYDCFFIVEGGAVVGAYLGRIRAEELSAEEAVRAIRD VVDSVGFALLDVYELEPELLELIKRVNDECLLKEPFTPTEVEEAAPEVEEPERDELLEKLGVDLDAIYESVEAVLEDYFE EEDPFEEFKRMLRALGTQDARVYLRVKVPEGVDERMLEEVRRDLEHALSEFSIDGVEITPSLKEKETVTLRIRDIMKRIR GG
Specific function: Unknown
COG id: COG1667
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27713; Mature: 27581
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVTPRVSPTESDIEVGSWKEIEEIVSSLSSGLVRITTRDHEDIYDCFFIVEGGAVVGA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCHHHHH YLGRIRAEELSAEEAVRAIRDVVDSVGFALLDVYELEPELLELIKRVNDECLLKEPFTPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCC EVEEAAPEVEEPERDELLEKLGVDLDAIYESVEAVLEDYFEEEDPFEEFKRMLRALGTQD HHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC ARVYLRVKVPEGVDERMLEEVRRDLEHALSEFSIDGVEITPSLKEKETVTLRIRDIMKRI CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHH RGG CCC >Mature Secondary Structure TFVTPRVSPTESDIEVGSWKEIEEIVSSLSSGLVRITTRDHEDIYDCFFIVEGGAVVGA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCHHHHH YLGRIRAEELSAEEAVRAIRDVVDSVGFALLDVYELEPELLELIKRVNDECLLKEPFTPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCC EVEEAAPEVEEPERDELLEKLGVDLDAIYESVEAVLEDYFEEEDPFEEFKRMLRALGTQD HHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC ARVYLRVKVPEGVDERMLEEVRRDLEHALSEFSIDGVEITPSLKEKETVTLRIRDIMKRI CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHH RGG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA