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The map label for this gene is 20093966

Identifier: 20093966

GI number: 20093966

Start: 492151

End: 493311

Strand: Direct

Name: 20093966

Synonym: MK0528

Alternate gene names: NA

Gene position: 492151-493311 (Clockwise)

Preceding gene: 20093964

Following gene: 20093967

Centisome position: 29.04

GC content: 57.71

Gene sequence:

>1161_bases
GTGGCTGATCCCTCTAAAGACGTTAAGAAGCTGTCGATGATACTCGAATCGGAGGAATGGCGCGTAGAAAAAGCCATAGA
GCGTGGCACGATCCGGCGTGTGAGGACGTCTTTCCCGGGCTTCGTCTACTACAGAACCGTACGGGAATTCGCCGGGTTCG
AGCGAGGAACCTTGATCGTCCCGAGCCACGGGTTGTTGCTGCGCGGGTTTCCCAAGATTGAGCGCGCGTTGTTGCTTGAG
CCGGCTCTCAGGTCGAGGTTCGGTGAGGTGGGGAAAGTGATCGTAGAGGAGAAGATGAACGGTCACAACGTACGCGTGTT
CGAGCTGGACGGAGAGGTGTACGCGGCCACGCGCGGGGGTTTGATCTGCCCGTACACTACTCACAAGCTCCGGAACATGT
TTGAGGATGAGTTGAAGCAGTTCTTCGAGGACTACCCCGGAACGGTAGTCTGTGGTGAGTTCGTGGGGAAGGAGAATCCG
TACGTGTCCCGCGAGTACCCGGAAGCCCGTGACGTGGGGTTCTTCGTGTTCGACGTCCGGGACCCGAGCGGACGGTTCTG
GTCGTACGAGGAGAAACTGAAGGTGGACGAGTACGGGCTCGAACGCGTTCGGTGCTTCGGTGAGTTCGAGGTGAGCGAAG
TCGAGGAGATCCACCGTATCGTCCGCGAGCTCGATCGTGAAGGTCGGGAAGGTATCGTCATCAAGGATCCGGATCGAAAG
CTGCCTCCATTGAAGTACACGACACACTCGGCGCACGTTGAGGAGATCGAGTGGGCGTTCAGGTTCGCGTTCGACTTAGG
TCGTGACTTCGTGCTGACTCGCACGATCCGCGAAGGATTCCAATCGTTTGAATGGTGTGAAAAAGATAGAGAGCTGAAGC
GTCGGGGCGCGGAGATAGGGCGAGCGATAGTAGAGGGATTGAGGAGGGCTGTGGAGCAGGTGGTGGAAGAAGGCGAGGCC
TACGAAGAGATCCCACTGACCTTCGAATCACGGGAGTGGTTCGAACGGTACGAAGACTTCGTGAAACGGGTCACCGGAGG
CACTCATTCGCTGAAGATCATCGAAGAGAAGGAGGACGGAACCGTCCGTGCGGTGCTGCGGAAGCGTTACTTCGGGACCG
GTGATAAGGTGTCACGAATCCTCGAGGAGGGGGTCCTGTAG

Upstream 100 bases:

>100_bases
AGAAGACACCACCGCACCCACTAGGAAAGCGACCAGTGCACACAGTACGTCTTTACGATCCAACGTCCTCTTCCTTCCCC
CTCGTCCGCGGGGTGAGAGC

Downstream 100 bases:

>100_bases
GGGTTTGATAGAAGTAGAGATTCCAGGTCGAGGCGAACTGCGGCTAGAGCACCTAGTTCTCGATTACAACGGCACGATAG
CCTCGGGAGGAAAGTTGCTC

Product: ATP-dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MADPSKDVKKLSMILESEEWRVEKAIERGTIRRVRTSFPGFVYYRTVREFAGFERGTLIVPSHGLLLRGFPKIERALLLE
PALRSRFGEVGKVIVEEKMNGHNVRVFELDGEVYAATRGGLICPYTTHKLRNMFEDELKQFFEDYPGTVVCGEFVGKENP
YVSREYPEARDVGFFVFDVRDPSGRFWSYEEKLKVDEYGLERVRCFGEFEVSEVEEIHRIVRELDREGREGIVIKDPDRK
LPPLKYTTHSAHVEEIEWAFRFAFDLGRDFVLTRTIREGFQSFEWCEKDRELKRRGAEIGRAIVEGLRRAVEQVVEEGEA
YEEIPLTFESREWFERYEDFVKRVTGGTHSLKIIEEKEDGTVRAVLRKRYFGTGDKVSRILEEGVL

Sequences:

>Translated_386_residues
MADPSKDVKKLSMILESEEWRVEKAIERGTIRRVRTSFPGFVYYRTVREFAGFERGTLIVPSHGLLLRGFPKIERALLLE
PALRSRFGEVGKVIVEEKMNGHNVRVFELDGEVYAATRGGLICPYTTHKLRNMFEDELKQFFEDYPGTVVCGEFVGKENP
YVSREYPEARDVGFFVFDVRDPSGRFWSYEEKLKVDEYGLERVRCFGEFEVSEVEEIHRIVRELDREGREGIVIKDPDRK
LPPLKYTTHSAHVEEIEWAFRFAFDLGRDFVLTRTIREGFQSFEWCEKDRELKRRGAEIGRAIVEGLRRAVEQVVEEGEA
YEEIPLTFESREWFERYEDFVKRVTGGTHSLKIIEEKEDGTVRAVLRKRYFGTGDKVSRILEEGVL
>Mature_385_residues
ADPSKDVKKLSMILESEEWRVEKAIERGTIRRVRTSFPGFVYYRTVREFAGFERGTLIVPSHGLLLRGFPKIERALLLEP
ALRSRFGEVGKVIVEEKMNGHNVRVFELDGEVYAATRGGLICPYTTHKLRNMFEDELKQFFEDYPGTVVCGEFVGKENPY
VSREYPEARDVGFFVFDVRDPSGRFWSYEEKLKVDEYGLERVRCFGEFEVSEVEEIHRIVRELDREGREGIVIKDPDRKL
PPLKYTTHSAHVEEIEWAFRFAFDLGRDFVLTRTIREGFQSFEWCEKDRELKRRGAEIGRAIVEGLRRAVEQVVEEGEAY
EEIPLTFESREWFERYEDFVKRVTGGTHSLKIIEEKEDGTVRAVLRKRYFGTGDKVSRILEEGVL

Specific function: Unknown

COG id: COG1423

COG function: function code L; ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012310
- InterPro:   IPR001072 [H]

Pfam domain/function: PF01068 DNA_ligase_A_M [H]

EC number: NA

Molecular weight: Translated: 45141; Mature: 45010

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPSKDVKKLSMILESEEWRVEKAIERGTIRRVRTSFPGFVYYRTVREFAGFERGTLIV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE
PSHGLLLRGFPKIERALLLEPALRSRFGEVGKVIVEEKMNGHNVRVFELDGEVYAATRGG
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCC
LICPYTTHKLRNMFEDELKQFFEDYPGTVVCGEFVGKENPYVSREYPEARDVGFFVFDVR
EECCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEE
DPSGRFWSYEEKLKVDEYGLERVRCFGEFEVSEVEEIHRIVRELDREGREGIVIKDPDRK
CCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
LPPLKYTTHSAHVEEIEWAFRFAFDLGRDFVLTRTIREGFQSFEWCEKDRELKRRGAEIG
CCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIVEGLRRAVEQVVEEGEAYEEIPLTFESREWFERYEDFVKRVTGGTHSLKIIEEKEDG
HHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
TVRAVLRKRYFGTGDKVSRILEEGVL
HHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ADPSKDVKKLSMILESEEWRVEKAIERGTIRRVRTSFPGFVYYRTVREFAGFERGTLIV
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE
PSHGLLLRGFPKIERALLLEPALRSRFGEVGKVIVEEKMNGHNVRVFELDGEVYAATRGG
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCC
LICPYTTHKLRNMFEDELKQFFEDYPGTVVCGEFVGKENPYVSREYPEARDVGFFVFDVR
EECCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEE
DPSGRFWSYEEKLKVDEYGLERVRCFGEFEVSEVEEIHRIVRELDREGREGIVIKDPDRK
CCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
LPPLKYTTHSAHVEEIEWAFRFAFDLGRDFVLTRTIREGFQSFEWCEKDRELKRRGAEIG
CCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIVEGLRRAVEQVVEEGEAYEEIPLTFESREWFERYEDFVKRVTGGTHSLKIIEEKEDG
HHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
TVRAVLRKRYFGTGDKVSRILEEGVL
HHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]