Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093878

Identifier: 20093878

GI number: 20093878

Start: 411681

End: 412184

Strand: Direct

Name: 20093878

Synonym: MK0440

Alternate gene names: NA

Gene position: 411681-412184 (Clockwise)

Preceding gene: 20093867

Following gene: 20093879

Centisome position: 24.29

GC content: 55.16

Gene sequence:

>504_bases
GTGAGGCCCCTCCCTCTGATCGTAGCTTGTGCGGTCGCCCTTGCAAGTCCTGCACTGGCGTGGGAACGGACGGAAGTCAG
CGTGGACACGTACGTCCTGAATTATGAAGGCGACGCTCCGAACCACTTGATGTTGGACGTCGATATCGCGGACGAGAACG
GTAACGTGTTCGTAGGCTGGCTCCTGGACGGCCTGGAAAGTAAATCGGAACCGAGAGTCTGGGAGGGACTCATGGATCGT
GTTACGGTGATACTGAACGCCATTTACGACGACGGGAAGCTGAGGCTTGAGATGAGGAAAACGTTCACGGTGCACTTCGA
TTACGATGGAAACGACGGAGTGCACGTATACGTAAAAGGGGACGACGCCCCAATCATCAGGACCGAGGACGGCCGAACAG
TGCTCGTATGGGAAAGGTGTCAAAGACGGCGAATCCGAAGTTCTGAGGATAATGGTAGAAGGTGTGAACGGTCGGAGATG
GAAGGTAGAACGTGGAGAAGGTGA

Upstream 100 bases:

>100_bases
GGGTCTGCGGGCCGGGTCATGGTTTTTCCCGGAGGTGTTAACGTGACGGAACCGGAAAGAATATGGACGCGGTTTCCGAA
GGGTAACCGAGGGTGGGGCG

Downstream 100 bases:

>100_bases
ATACGTCGTCGTGCACTGGATCGCGGAAGGGTGGGCACGGATTAGGGTCAAAGTGGCGGCTTCGAACAGCGGAAAGGTCC
TTAGGGTCTTGGACATTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGWLLDGLESKSEPRVWEGLMDR
VTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKGDDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEM
EGRTWRR

Sequences:

>Translated_167_residues
MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGWLLDGLESKSEPRVWEGLMDR
VTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKGDDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEM
EGRTWRR
>Mature_167_residues
MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGWLLDGLESKSEPRVWEGLMDR
VTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKGDDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEM
EGRTWRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19211; Mature: 19211

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGW
CCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEE
LLDGLESKSEPRVWEGLMDRVTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKG
EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEC
DDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEMEGRTWRR
CCCCEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGW
CCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEE
LLDGLESKSEPRVWEGLMDRVTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKG
EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEC
DDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEMEGRTWRR
CCCCEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA