| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093878
Identifier: 20093878
GI number: 20093878
Start: 411681
End: 412184
Strand: Direct
Name: 20093878
Synonym: MK0440
Alternate gene names: NA
Gene position: 411681-412184 (Clockwise)
Preceding gene: 20093867
Following gene: 20093879
Centisome position: 24.29
GC content: 55.16
Gene sequence:
>504_bases GTGAGGCCCCTCCCTCTGATCGTAGCTTGTGCGGTCGCCCTTGCAAGTCCTGCACTGGCGTGGGAACGGACGGAAGTCAG CGTGGACACGTACGTCCTGAATTATGAAGGCGACGCTCCGAACCACTTGATGTTGGACGTCGATATCGCGGACGAGAACG GTAACGTGTTCGTAGGCTGGCTCCTGGACGGCCTGGAAAGTAAATCGGAACCGAGAGTCTGGGAGGGACTCATGGATCGT GTTACGGTGATACTGAACGCCATTTACGACGACGGGAAGCTGAGGCTTGAGATGAGGAAAACGTTCACGGTGCACTTCGA TTACGATGGAAACGACGGAGTGCACGTATACGTAAAAGGGGACGACGCCCCAATCATCAGGACCGAGGACGGCCGAACAG TGCTCGTATGGGAAAGGTGTCAAAGACGGCGAATCCGAAGTTCTGAGGATAATGGTAGAAGGTGTGAACGGTCGGAGATG GAAGGTAGAACGTGGAGAAGGTGA
Upstream 100 bases:
>100_bases GGGTCTGCGGGCCGGGTCATGGTTTTTCCCGGAGGTGTTAACGTGACGGAACCGGAAAGAATATGGACGCGGTTTCCGAA GGGTAACCGAGGGTGGGGCG
Downstream 100 bases:
>100_bases ATACGTCGTCGTGCACTGGATCGCGGAAGGGTGGGCACGGATTAGGGTCAAAGTGGCGGCTTCGAACAGCGGAAAGGTCC TTAGGGTCTTGGACATTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGWLLDGLESKSEPRVWEGLMDR VTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKGDDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEM EGRTWRR
Sequences:
>Translated_167_residues MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGWLLDGLESKSEPRVWEGLMDR VTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKGDDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEM EGRTWRR >Mature_167_residues MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGWLLDGLESKSEPRVWEGLMDR VTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKGDDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEM EGRTWRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19211; Mature: 19211
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGW CCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEE LLDGLESKSEPRVWEGLMDRVTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKG EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEC DDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEMEGRTWRR CCCCEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MRPLPLIVACAVALASPALAWERTEVSVDTYVLNYEGDAPNHLMLDVDIADENGNVFVGW CCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEE LLDGLESKSEPRVWEGLMDRVTVILNAIYDDGKLRLEMRKTFTVHFDYDGNDGVHVYVKG EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEC DDAPIIRTEDGRTVLVWERCQRRRIRSSEDNGRRCERSEMEGRTWRR CCCCEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA