Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 198284110

GI number:

Start: 2006381

End: 2009545

Strand: Reverse

Name: Not Available

Synonym: Lferr_2007

Alternate gene names: NA

Gene position: NA

Preceding gene: 198284111

Following gene: 198284109

Centisome position: NA

GC content: NA

Gene sequence:

>3165_bases
ATGAACCACTGGCTGCTCGATGCAATGGCAGAACGACGCAGCCATGCGCTGCGTGAGGCCGATCGCGTGCAGTTCCATCA
GGAAATGGGGCGCGAGGTCCCCGCCTTTGATGAGGCGCTGCTGCGCGAGACGGCGGCCGCGCTGGAAATCGCCGTGCTCG
ACCTGAAGGTGGATCGCCTAGCCGATGAACCTGAGCAGTTGGCATTGTCGCGCCAGGCGGCGGCGGACGCCTTCCGGCTC
TTGCGCATGTTGCCCTTGCCTGCCGACCCCATGGTGGCGGGCTCGCACCTGCTGCGCGCATCGGTACTGGCCGTGTTGGG
TGATCGCGGCGCCGATGCCGCGCGCTGGCTACGCACACTGGACGAGGCGGGGCATTGGCCCGCCTTGCCGCTGGAGGCAC
GCAACTGGGGCAAACGCTGTCGGGCCGCCCTTACCGATGTCTGGCTGCGTCTGGTGCGCAAAAGAGGTTGGAGTGACCGC
GATGCGGTGCTTGAGCGCGTGGCGGCGCTGCGTAGCGCGCAGGAGGAGTTCGAGCGCGATTACCTGCACACCTTCGCACC
GCTGGAAGCCAAGCGTACTGCGCTTGAGCTGATCGGGATCTACCACCTGGCCAAGGCAGCGGACGTACTGGCCCACTACA
TCACCGACGGTGTAGTGGACGGCAGTTTCCAAGTGCAGCCTTTGTTGGATAGTCACTTCGACCGAGCCATCGATGCTTGT
GACGCTGCGCAGCTCGTTGAGTTGGGGCCGATGACGCGACTGCTGGCCCGCGCTTCTGCGCAAATGGTGGACAACGCTCT
GTGGACGGTGACTCGGAAAGTGAACTCCCGCGTAACCGACTTTGTGCGCGAGCTAGTGAAACGTGGACGCGGCGACCGTG
CTTTGTTCGATGTGCTGCCCCCGCAACGCCGCACCTTGGCCGAGCGTGGACTGCTGGGTTCCAGTCGACAGGCTGTGGTG
GTGAGTCTGCCGACCTCCAGCGGCAAGACCCTCATTGCCCAGTTCCGCATGTTGCAGGCGCTGAATCAGTTCGAGGATCG
CAAAGGCTGGGTGGCCTATCTCGCACCCAGTCGGGCGCTGGTCAATCAGGTCACGCGGCAACTGCGCCGTGATTTCCAGC
CACTAGGGCTGATGGTGGAGCGCATCAGCCCGGCCATGGAGATCGACGGCATCGAGGCCGGCGTGCTGGCGGAGGCGAAC
GACGAGGTGCGTTTCCGAATCCTCGTGGCTACGCCCGAGAAGTTCGATTTGATGCTGCGCCAGGGCTGGGAGGAAAAGAT
CGGGCGCCCACTGACTCTGGTGGTAGTGGATGAAGCGCACACCATTCAGGACAAGGTGCGTGGCCTGCGCCTGGAGTTGT
TGCTGGCCACCATCAACCGGGAGTGCCGAGACGCGCAATTCCTACTGCTCACGCCCTTCATTCAAAATGCACGCGAGGTG
GCGCGCTGGCTCGGCGGCCAAAATTCGGAGGACATCAGTCTGGGCGTGGACTGGCAACCCAACGACCGGGCCATCGGCAT
CGTCAGCCCGGTGGACGACGGCCGCAAGAACGGGCGCAGCCGTGACTACCGGCTGGATTTCGAAACGGTGCATACCACGC
GCCCCAGCATAGTGCTGGATGAAGCCTTTTCGCTGGGCAAGGACGAGACACTGGCCGGTACGCTTTCAGAAGCGAGGGAT
GTAGGCGCTTTGGCCGGAATTACCGCGCGCAAGCTCATGGTGCGGGGGCCTGTTATCGCCATGCACAGCCGGCCAGATTA
CGTCTGGAAGCTTGCCGAGAGACTTAAATCCGGGCAGGCCGGGGCTATGTCCGACGATGTGCGCTTCGTGCAGGAATATG
TGGCAGCCGAACTGGGGGCGCAGTACCCCTTGGTCGATTTGCTCGCCCATCGCATCGGCATGCACCACGGCGGTTTGCCT
GAAGAAATCCGTATGCTCATGGAGTGGTTGTTCGAAAAAGGGCAGCTCGATGTGCTGGCTGCAACCACGACCATTGCTCA
GGGTGTGAACTTCCCTGTCAGCGGGGTGGTGATGGCCGCCACGCAATACCCTTATGGGCAAACCATGCCTCCGGAGGATT
TCTGGAACATCGCTGGCCGCGCCGGTCGTGTGTCTCAGGGGCAACTGGGGGTAGTGGCGTTGGTGGCCAAAGATGAAAGC
GAAGTGGCACAACGTCGCGAATTCATCAACAGCAACACTGGTGATCTGAATTCCGCCCTGATTCAATTGGCGCAGGCTGC
ATCTGGTGAGTTGTCTGATCTTGGAAGAATTGTTTATAGCCGCCCGGAGTGGTCGAGCTTCTTGCAATATCTCGTTCACA
CCTATCGGCAAATGGGTGCGCCGTCCAACTTTGCCGATCAGATCGAGCAGGTGCTGCGCGGCACACTGGGCTTCGAGAAG
TTGCGCACCGCTGATAGTCAGCTTGCCCGTCATCTGCTGGACGGGATTCGAACCTATGTCGATGACATGGTCCGCCCGCA
ACAACCGTTGAAGCTGGTGGACAGCACTGGCTTTTCATTGCAGAGCATCAAGACTGTTCTCACGCATAAAGGCGACATCG
GGCCGGATTCGTGGAATCGGGAGCGGCTGTTCCGTGAGGGCGACCGTACCTTGCAGGACATGATGGGCGTGCTTCTGCGT
GTTCCTGAGCTGCGTGAGAATTTGGAAACTGTTCTGGGCGGCAGGGCACCGGACGGGGACAAGCTCGCGCTCATCCTCAA
GGATTGGGTCAATGGTGAGGAAATCACCACCATCGCCGCCCGCCATTTCCGCAAAGAGGGTTACGACGAAGTGACAGCAC
TCACCAAATGCGGGCAGAACCTCTTCGGCAAGCTTGCGCAGACATCTTCCTGGGGCCTGAACGCACTGCTAGCGATTACC
GCATCTAACCTCTCCGACGACGAACACACCCGGCTGGCCAACCTGCCATCGCAGGTGTTTTACGGGGTGGCCACGGACGA
AGCCATCGCCTTGCGTTTGCTTGGAGTGCCGCGCAAGGCGGCGACGCCACTGGCCAAGGTGTTGAAACTGGATGCCACGA
CGTCTCTGCCGACAATTCGTCAGCGACTCTCCGCGCTGACGGAACGGGACTGGCTTCAGGCCTTGGGGCCGGTCGGTGGC
ACCTATCGTAAGGCTTGGCAGATCATGGACGGGACACTGGACTGA

Upstream 100 bases:

>100_bases
CGGATCGCCTGCAAGCCCCGGCGAGTTGCCTCCTTATCGCCCTCTATCTGCCTTGGCCCATTGCGCAACTGCCGCAGGCC
ATCAGCCAGGGAGGTGCTGC

Downstream 100 bases:

>100_bases
TGGCCGACCAACCTACAAAACTGGCCATGCTCAAGACCTGTAAAAAATGGCTGATGCAGCAGCTATTCCCGATGCTGGAC
GAGGTGCCCGCATGAAGCCG

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1054_residues
MNHWLLDAMAERRSHALREADRVQFHQEMGREVPAFDEALLRETAAALEIAVLDLKVDRLADEPEQLALSRQAAADAFRL
LRMLPLPADPMVAGSHLLRASVLAVLGDRGADAARWLRTLDEAGHWPALPLEARNWGKRCRAALTDVWLRLVRKRGWSDR
DAVLERVAALRSAQEEFERDYLHTFAPLEAKRTALELIGIYHLAKAADVLAHYITDGVVDGSFQVQPLLDSHFDRAIDAC
DAAQLVELGPMTRLLARASAQMVDNALWTVTRKVNSRVTDFVRELVKRGRGDRALFDVLPPQRRTLAERGLLGSSRQAVV
VSLPTSSGKTLIAQFRMLQALNQFEDRKGWVAYLAPSRALVNQVTRQLRRDFQPLGLMVERISPAMEIDGIEAGVLAEAN
DEVRFRILVATPEKFDLMLRQGWEEKIGRPLTLVVVDEAHTIQDKVRGLRLELLLATINRECRDAQFLLLTPFIQNAREV
ARWLGGQNSEDISLGVDWQPNDRAIGIVSPVDDGRKNGRSRDYRLDFETVHTTRPSIVLDEAFSLGKDETLAGTLSEARD
VGALAGITARKLMVRGPVIAMHSRPDYVWKLAERLKSGQAGAMSDDVRFVQEYVAAELGAQYPLVDLLAHRIGMHHGGLP
EEIRMLMEWLFEKGQLDVLAATTTIAQGVNFPVSGVVMAATQYPYGQTMPPEDFWNIAGRAGRVSQGQLGVVALVAKDES
EVAQRREFINSNTGDLNSALIQLAQAASGELSDLGRIVYSRPEWSSFLQYLVHTYRQMGAPSNFADQIEQVLRGTLGFEK
LRTADSQLARHLLDGIRTYVDDMVRPQQPLKLVDSTGFSLQSIKTVLTHKGDIGPDSWNRERLFREGDRTLQDMMGVLLR
VPELRENLETVLGGRAPDGDKLALILKDWVNGEEITTIAARHFRKEGYDEVTALTKCGQNLFGKLAQTSSWGLNALLAIT
ASNLSDDEHTRLANLPSQVFYGVATDEAIALRLLGVPRKAATPLAKVLKLDATTSLPTIRQRLSALTERDWLQALGPVGG
TYRKAWQIMDGTLD

Sequences:
NA

Specific function: NA

COG id: COG1204

COG function: function code R; Superfamily II helicase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA