Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

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Identifier: 198283533

GI number:

Start: 1372189

End: 1375326

Strand: Direct

Name: Not Available

Synonym: Lferr_1415

Alternate gene names: NA

Gene position: NA

Preceding gene: 198283531

Following gene: 198283535

Centisome position: NA

GC content: NA

Gene sequence:

>3138_bases
ATGTTTTATAAATATAGTACCGACAACGTCCAGGGACGCAGTTTGAATCACTCGCACCAGCAATCGCCCCGACACAACTC
CTATGTCCCGCGCTGGCTGCACCGGCTTTGGCTGGGTTTCATGGCGGTCGTGTTGGTGGCAGGGGCATGGCTGGCCTGGT
CCGACTGGCAGCAAACCCGGTCTTGGGAGATATCCGGCCTTCGGACGCTGGTGGCATCGGTGGCGGAGGGGACGCGGGTG
ATGCTGGATGGCACCCGGATCTCGCTGGTGTTGCTGGGGCGGCAATTGGAGTCGGGTTCGCCGGTCCTGGGCCCCGGCGC
AGGAAAAATGCTGCGGGACTATCTCGCGCTGCAGCCGGATCTGGCCGCTGTGGGGACCCGCATACCCGATGGGCAGGTGC
TAACGGCAGGCGGAGGCCGGCATTTCCTCGCCGATCTCCTGTTTGCCCTCGATAACCCGGTGAATGCCCGGCGGCTGGGG
CTAAATCCGGTGCAGCGGAGCGCGCTGGCCCAATGCCTGCATTCCCCGGGCTTCTGCCTTGGCCCTCCGGTACGCGATGT
TTTCGCCGGGGCCGGTCATGGCCTCTGGATGATCCCCCTCTTTCAAGTAGTTCCGATCAAGGGCGGCAGCCGGCAATTGG
TCGCCTTGCTGCCGCTCGTGGACGGTCGCATGCCGTCCTGGCGGGGGCTGCCGCTGCCATCCCGGGTGTCCATCTTCCTG
CTGCGGGACGACGGCTTCCTGGAAAGCCGTTCTCCGCCGCCCACCCAGACCACTTACGCCGTCCGCCAGCACGGCATTGC
CGCGCGCTATGTCCTTGCCCATCCGGAACTGCCGTCGGGCGTCTATTATGGCCTGTCCACGGCGGTGGACCAGTGGCGCC
TGGGTGCCGTGCAGCGGATCAAAGGCTATCCCCTGGTGGCAGGGGTGGGCATTCCGCGTTCCGTTTTGTGGGCGGACTGG
TGGAATAGCGTCGAGGGGCCAGCCGCCGGTGCGTTCGGTCTGCTGCTGTTGTCCATCTTCGGCTACGGCTACCTGCGGCG
GGTCGGCCGAGAGCGGGAGGGGGAACGGCAAAGCGCGGAGCAGACCCTGTGGGAGGAGAAGGAGCGGGCGGAAGTCACCC
TGCATTCCATCGGGGATGCGGTGATCACCACCGATACCGAAGGCCGGGTGATGGACATGAACGTCGTCGCCGAAGCGTTG
ATGGGCTATGCCCGGACGGAAGCCGTGGGCAGGCCCCTGGAAGACGTCTTCCGCATTGTCCAGGAAGGCAGCCATGCTCA
TTTGGACAATCCCGTCCGGCGAGTTCTGGAAGAGGGCCAGGTGGTGAGGCTGGCCAACCACACCATGCTCCTCACCAAGG
ACGGCCAGGAACGCGCCATCGAGGACAGCGCGGCGCCCATCCGAGACCGGCAGGGCGTACTGTTGGGCGTGGTCCTGGTC
TTCCACGACGTCACCGAGAAGCGCCGGCTGATCGCCGAACTGGCCCATCAGGCCACCCACGACGCCCTCACGGGCCTCCC
CAACCGGGTGCTCTTCATGGACCGGCTGGGCCATGATCGAGCCCAGACCCTGCGCCATGAGCACCTGCTGGCGGTGGGTA
TCCTGGACCTGGACGGCTTCAAGCAGGTCAATGACCACTTCGGACATGCCGCTGGCGACGCCCTGCTGCAGGAAATGGCA
CAAAGGTTGCGTAGGGAAATGCGTTCCGGGGACACCTTGGCACGCATGGGCGGCGACGAGTTTGGGCTGCTCCTCTCGGA
TGTCGGGAGCCTGGAACAGGTGGAAGACGCCTGCACGCGCCTGCTGGAAGTGCTCCGCGCTCCCTTCTATCTGGGAGACG
AGGAGATCCCGCTGTCCTCCAGCATCGGCCTGACCAGCTATCCGCTGGATGACAGCCTGCCGGAGGACCTCCTGCGCCAT
GCGGATCTGGCCCTCTATGCGGCCAAGGCCGCCGGGCGGGATCGCTATCATTGGTTCGACTGGCCGATGGACAAGCTGCA
GCAAGAGGCCATGGAGGTGCGGAAGATGACGGAAAATGCGCTCGATCGGGGCCGCCTGCTGCTCCACTATCAGCCCGTGG
TGGAGATCGGCAATGGTCCCGTGGGCGTGGAGGCCCTGATCCGCCTCGACCACCCCGAGCGCGGCCTGCTGCCTCCCGCC
GCCTTCGCCGCCGCCCTCGACGCACCGCGCCTGACCCGGCACATCGGCTGCTTCGTGCTTGCCACGGCTCTGACCCAGAC
CCAGACTTGGCATCGGCAGGGCATGCCCTTGCGCGTCTCGGTGAATATCAGCGCCCACCATCTCCTGGACCAGCGCTTTC
TGTCCGACCTGCGGGCCGCCCTCGACGCCCATCCGGATCTGCCCCCATCCGCCGTCGAGATCGAGATCACTGAAACGGCC
CCGCTGCTGGATTTCGCCGGGGCGCGGGAAACCCTGCTGGCCTGCAACCGCCTGGGAGTGCGCATCGCCCTCGACGACTT
CGGCACCGGCAACGCCTCGCTGACCTATCTGCAGAAGCTGCCCGCGCAGACCATCAAGATCGATCAGAGCTTCGTGCGCG
ACATCATCAACGATCCCAAGGATTACGCCATCGTCTCCGGCGTGGTCACCAGCGCCCGACTCTTGGGCCTGGAAGTGATT
GCCGAAGGGGTGGAAACGGCCGAACACGCCGCCATGCTTGGCCACTTGCAGTGCCACTGCCTGCAAGGCTATGCCATCGC
CCGGCCCATGGCACCGGAAGCGATCCCGGGTTGGATCAGACAGTATAAGCCTTTGCTTTATCATGGTTTTTCTGCAACGC
CTACCCCAACTAGCATGATTTCAATTCATAATCAACGTGTTAAAAGATTTATTGGAGCGCTGCGCCACCAGGCTCCCTTT
CCCTCCTTGGTCATCGAACCCGAGGCGGAGCAGCAATGCCATTTGGGACTATGGTTGCAAGGGGAAGGAAGGCTCCAATA
TGGGGACGACGCGGCCTTCTACCAGCAATTGCTGGCACGGCACGCCCATCTGCACGCCCTAGCCCGGGAAGCCAAGGCCC
TGTACGACGCGGGGGACGGGGAAGGGGCGGAGCAGAAAGGGGCGGAGTTGGAACGGGAAAACCAAGCGCTGAACTCGCTC
ATCATCACAACTCATTGA

Upstream 100 bases:

>100_bases
CGGAGGGGTGGAAGTTCGCCAGGAAGCTCGCATGGCAATAGTCGCCTTTCATATCGGCTGGAGAATCCCATACCGGCCCG
CTCTGGTGGCGGTCGTTTAG

Downstream 100 bases:

>100_bases
CCAAAATACGCGACAAGCTCCGCCCTCCAGGGTGGGGTAGTTGACGACCCACACCGGTATCTGCACGGTCGCCATATTCC
GCGACTTTTCGAAGCATCTT

Product: PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1045_residues
MFYKYSTDNVQGRSLNHSHQQSPRHNSYVPRWLHRLWLGFMAVVLVAGAWLAWSDWQQTRSWEISGLRTLVASVAEGTRV
MLDGTRISLVLLGRQLESGSPVLGPGAGKMLRDYLALQPDLAAVGTRIPDGQVLTAGGGRHFLADLLFALDNPVNARRLG
LNPVQRSALAQCLHSPGFCLGPPVRDVFAGAGHGLWMIPLFQVVPIKGGSRQLVALLPLVDGRMPSWRGLPLPSRVSIFL
LRDDGFLESRSPPPTQTTYAVRQHGIAARYVLAHPELPSGVYYGLSTAVDQWRLGAVQRIKGYPLVAGVGIPRSVLWADW
WNSVEGPAAGAFGLLLLSIFGYGYLRRVGREREGERQSAEQTLWEEKERAEVTLHSIGDAVITTDTEGRVMDMNVVAEAL
MGYARTEAVGRPLEDVFRIVQEGSHAHLDNPVRRVLEEGQVVRLANHTMLLTKDGQERAIEDSAAPIRDRQGVLLGVVLV
FHDVTEKRRLIAELAHQATHDALTGLPNRVLFMDRLGHDRAQTLRHEHLLAVGILDLDGFKQVNDHFGHAAGDALLQEMA
QRLRREMRSGDTLARMGGDEFGLLLSDVGSLEQVEDACTRLLEVLRAPFYLGDEEIPLSSSIGLTSYPLDDSLPEDLLRH
ADLALYAAKAAGRDRYHWFDWPMDKLQQEAMEVRKMTENALDRGRLLLHYQPVVEIGNGPVGVEALIRLDHPERGLLPPA
AFAAALDAPRLTRHIGCFVLATALTQTQTWHRQGMPLRVSVNISAHHLLDQRFLSDLRAALDAHPDLPPSAVEIEITETA
PLLDFAGARETLLACNRLGVRIALDDFGTGNASLTYLQKLPAQTIKIDQSFVRDIINDPKDYAIVSGVVTSARLLGLEVI
AEGVETAEHAAMLGHLQCHCLQGYAIARPMAPEAIPGWIRQYKPLLYHGFSATPTPTSMISIHNQRVKRFIGALRHQAPF
PSLVIEPEAEQQCHLGLWLQGEGRLQYGDDAAFYQQLLARHAHLHALAREAKALYDAGDGEGAEQKGAELERENQALNSL
IITTH

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA