| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120037
Identifier: 197120037
GI number: 197120037
Start: 4203906
End: 4204244
Strand: Direct
Name: 197120037
Synonym: Gbem_3676
Alternate gene names: NA
Gene position: 4203906-4204244 (Clockwise)
Preceding gene: 197120036
Following gene: 197120039
Centisome position: 91.09
GC content: 48.08
Gene sequence:
>339_bases ATGTCTAAAAGCCTGGATGATCTGAGGAAGTGGATTGAAGAAGAGAAAAAGCAGTCTGAACTGCGGTTACAGGAGTTGAG AGAAAGATCATCCGCCACTGAACCGGAACCAGATGATGAGCCGATTCGTTGTCCCAAGTGCAGATCAAGTCAGATAACGG CCCAAAGAGATGGCGTGAGTTTGAGTCGCGCTGCTGTCGGAGGCTTTCTCTTTGGTGGTGCTGGTATGGTTACAGGCGGG TTAGGTGGCAATAAAATCTTAATCACATGCCTGAAGTGCGGCAAACAGTGGAAGCCTGGACAGGAACAAACCATCTTTGA ACGATATTTCAGTGACTGA
Upstream 100 bases:
>100_bases AAGACGCTGGAATTATTCTTCAAATGACGCTTGCGGCCACTATCTTAAATCTGTATAGTTAGCGCTCAAAAATTTAACAC TGCCACTTGGAGCCACGACG
Downstream 100 bases:
>100_bases AATCTTATATAAGCCCCCTAGTCCCTTTCGCGGGTCGAAGGTGCCCTACGCGCTTTTTGGAAGTCGATCTCATTTTGCCC CCCGCCCCCACCTCCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSKSLDDLRKWIEEEKKQSELRLQELRERSSATEPEPDDEPIRCPKCRSSQITAQRDGVSLSRAAVGGFLFGGAGMVTGG LGGNKILITCLKCGKQWKPGQEQTIFERYFSD
Sequences:
>Translated_112_residues MSKSLDDLRKWIEEEKKQSELRLQELRERSSATEPEPDDEPIRCPKCRSSQITAQRDGVSLSRAAVGGFLFGGAGMVTGG LGGNKILITCLKCGKQWKPGQEQTIFERYFSD >Mature_111_residues SKSLDDLRKWIEEEKKQSELRLQELRERSSATEPEPDDEPIRCPKCRSSQITAQRDGVSLSRAAVGGFLFGGAGMVTGGL GGNKILITCLKCGKQWKPGQEQTIFERYFSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12508; Mature: 12377
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSLDDLRKWIEEEKKQSELRLQELRERSSATEPEPDDEPIRCPKCRSSQITAQRDGVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LSRAAVGGFLFGGAGMVTGGLGGNKILITCLKCGKQWKPGQEQTIFERYFSD HHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SKSLDDLRKWIEEEKKQSELRLQELRERSSATEPEPDDEPIRCPKCRSSQITAQRDGVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LSRAAVGGFLFGGAGMVTGGLGGNKILITCLKCGKQWKPGQEQTIFERYFSD HHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA