Click here to switch to the map view.

The map label for this gene is 197120029

Identifier: 197120029

GI number: 197120029

Start: 4196314

End: 4196655

Strand: Direct

Name: 197120029

Synonym: Gbem_3668

Alternate gene names: NA

Gene position: 4196314-4196655 (Clockwise)

Preceding gene: 197120028

Following gene: 197120036

Centisome position: 90.92

GC content: 53.51

Gene sequence:

>342_bases
GTGAAGAAGACAGACAAGTACTTGAAACTGGTCGAGTGGTCCGAGGAGGATGGTTGTTATGTCGGGACCTGTCCAGGTCT
TATCTACGGCGGGGTCCATGGAGATAATGAGGCAGAGGTTTACCGTGAGCTTTGTGAAACGGTGGCGGAGGCAATAGAGC
TGTACGAAGCCGATGGCAAGCCGCTGCCACCTGCCACGGCAAATAAGGAGTACTCCGGTCGGTTTGTGCTGAGGGTCGAC
AAGGAGTTGCATCGCCAAGTAGCCATCCGTGCCCTCAGATCCGGCGAAAGCCTGAACAGCTATTGCCAAAAGATATTGAA
GAAAGCAATCGCGGAAGGCTAA

Upstream 100 bases:

>100_bases
ATCACTCACTGCCACCAAAGATCCGGGAACTCATAGAGCGTCTGTGACGCGAACCTTACCAGAAACGGCAGGTCGAAGCT
GCAATCAAGGAGTGCAAAAA

Downstream 100 bases:

>100_bases
CCCTTCACAGTTTGAGCCCATCTTAGCAAGAGCGTCTGATCTTCGGTCTCTTCGACATGAGTCCCGAACCCCTTACCCTG
GAGGTTCATGGTGTCACGCA

Product: HicB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKKTDKYLKLVEWSEEDGCYVGTCPGLIYGGVHGDNEAEVYRELCETVAEAIELYEADGKPLPPATANKEYSGRFVLRVD
KELHRQVAIRALRSGESLNSYCQKILKKAIAEG

Sequences:

>Translated_113_residues
MKKTDKYLKLVEWSEEDGCYVGTCPGLIYGGVHGDNEAEVYRELCETVAEAIELYEADGKPLPPATANKEYSGRFVLRVD
KELHRQVAIRALRSGESLNSYCQKILKKAIAEG
>Mature_113_residues
MKKTDKYLKLVEWSEEDGCYVGTCPGLIYGGVHGDNEAEVYRELCETVAEAIELYEADGKPLPPATANKEYSGRFVLRVD
KELHRQVAIRALRSGESLNSYCQKILKKAIAEG

Specific function: Unknown

COG id: COG4226

COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12625; Mature: 12625

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTDKYLKLVEWSEEDGCYVGTCPGLIYGGVHGDNEAEVYRELCETVAEAIELYEADGK
CCCCHHHHHHHHCCCCCCCEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PLPPATANKEYSGRFVLRVDKELHRQVAIRALRSGESLNSYCQKILKKAIAEG
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKTDKYLKLVEWSEEDGCYVGTCPGLIYGGVHGDNEAEVYRELCETVAEAIELYEADGK
CCCCHHHHHHHHCCCCCCCEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PLPPATANKEYSGRFVLRVDKELHRQVAIRALRSGESLNSYCQKILKKAIAEG
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA