| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119986
Identifier: 197119986
GI number: 197119986
Start: 4145858
End: 4146613
Strand: Direct
Name: 197119986
Synonym: Gbem_3625
Alternate gene names: NA
Gene position: 4145858-4146613 (Clockwise)
Preceding gene: 197119980
Following gene: 197119987
Centisome position: 89.83
GC content: 66.67
Gene sequence:
>756_bases ATGCAGAGCAAGGTGATCGAAAACATACTGCAAGAAGTCGGCGCAGGGTCGCTCGACGTTCAGACTGCACTGGAAAGACT AAAACACCTCCCGTTCGAGGACGTAGGGTGCGCGACGGTGGACCACCACCGCTCGCTGCGCCAGGGGTTTCCGGAAGTCA TCTTCGGCCAGGGGAAGAACTTGGCCCAGATGCGCACCATCATCGCGGCCCTCCTCGCCAAAGGGGGGAACGTGCTCGCC ACCCGCGTCAGCGCCGCCAAAGGGGCGAAGCTCAAGGAGACCTTCCCGCAGGCGGTCTACCACCCCGACGCGCGGGCGCT GACCATCGAGCAGCACCCGGTCGAGCTGCGCGGCAAGGGGAAGATCCTGGTGGTCTGCGCCGGCACCTCGGATATCCCGG TGGCGGCGGAGGCGCTCCTCACGGCGCGCCTGATGGGGAACGAGGTGGAGCATATCTACGACGTGGGGGTGGCGGGGCTG CATCGGTTGCTCGCGCGGCGCAGCGCTCTCGCCGAGGCATCGGTGATCATCGTGGTCGCCGGCATGGAAGGGGCGCTCCC CTCGGTGGTCGGGGGGCTGGTGGACAAGCCGGTGATAGCGGTCCCCACCTCCATAGGCTACGGCGCCTCCTTCGGCGGCG TGGCGGCGCTATTGGGGATGCTCAACTCCTGCGCCGCGGGGGTCACCGTGGTGAACATAGACAACGGCTTCGGAGCGGCG TACGCCGCGAGCCTGATGAATAGGGTGCATCGATGA
Upstream 100 bases:
>100_bases GGTGACATAAACTTTAGACAGAACGCATTTTTCTTGCAGCGAAACGCATTATTTGTGCTAGCCTTTGTTTTTTTCAATGT ACGGAGGCAAGATCCGATTC
Downstream 100 bases:
>100_bases AAGTGGCGTACTTCGACTGTTTTGCGGGAATCGCCGGCGACATGACCGTCGCTGCGCTGATCGAACTGGGTCTCCCGCTG GAGGTCCTGCGGCAGGAACT
Product: phosphoribosylaminoimidazole carboxylase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MQSKVIENILQEVGAGSLDVQTALERLKHLPFEDVGCATVDHHRSLRQGFPEVIFGQGKNLAQMRTIIAALLAKGGNVLA TRVSAAKGAKLKETFPQAVYHPDARALTIEQHPVELRGKGKILVVCAGTSDIPVAAEALLTARLMGNEVEHIYDVGVAGL HRLLARRSALAEASVIIVVAGMEGALPSVVGGLVDKPVIAVPTSIGYGASFGGVAALLGMLNSCAAGVTVVNIDNGFGAA YAASLMNRVHR
Sequences:
>Translated_251_residues MQSKVIENILQEVGAGSLDVQTALERLKHLPFEDVGCATVDHHRSLRQGFPEVIFGQGKNLAQMRTIIAALLAKGGNVLA TRVSAAKGAKLKETFPQAVYHPDARALTIEQHPVELRGKGKILVVCAGTSDIPVAAEALLTARLMGNEVEHIYDVGVAGL HRLLARRSALAEASVIIVVAGMEGALPSVVGGLVDKPVIAVPTSIGYGASFGGVAALLGMLNSCAAGVTVVNIDNGFGAA YAASLMNRVHR >Mature_251_residues MQSKVIENILQEVGAGSLDVQTALERLKHLPFEDVGCATVDHHRSLRQGFPEVIFGQGKNLAQMRTIIAALLAKGGNVLA TRVSAAKGAKLKETFPQAVYHPDARALTIEQHPVELRGKGKILVVCAGTSDIPVAAEALLTARLMGNEVEHIYDVGVAGL HRLLARRSALAEASVIIVVAGMEGALPSVVGGLVDKPVIAVPTSIGYGASFGGVAALLGMLNSCAAGVTVVNIDNGFGAA YAASLMNRVHR
Specific function: Unknown
COG id: COG1691
COG function: function code R; NCAIR mutase (PurE)-related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: NA
Molecular weight: Translated: 26141; Mature: 26141
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSKVIENILQEVGAGSLDVQTALERLKHLPFEDVGCATVDHHRSLRQGFPEVIFGQGKN CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCC LAQMRTIIAALLAKGGNVLATRVSAAKGAKLKETFPQAVYHPDARALTIEQHPVELRGKG HHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCC KILVVCAGTSDIPVAAEALLTARLMGNEVEHIYDVGVAGLHRLLARRSALAEASVIIVVA CEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE GMEGALPSVVGGLVDKPVIAVPTSIGYGASFGGVAALLGMLNSCAAGVTVVNIDNGFGAA CCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHH YAASLMNRVHR HHHHHHHHHCC >Mature Secondary Structure MQSKVIENILQEVGAGSLDVQTALERLKHLPFEDVGCATVDHHRSLRQGFPEVIFGQGKN CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCC LAQMRTIIAALLAKGGNVLATRVSAAKGAKLKETFPQAVYHPDARALTIEQHPVELRGKG HHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCC KILVVCAGTSDIPVAAEALLTARLMGNEVEHIYDVGVAGLHRLLARRSALAEASVIIVVA CEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE GMEGALPSVVGGLVDKPVIAVPTSIGYGASFGGVAALLGMLNSCAAGVTVVNIDNGFGAA CCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHH YAASLMNRVHR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]