| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is fldA [H]
Identifier: 197119968
GI number: 197119968
Start: 4124639
End: 4125109
Strand: Direct
Name: fldA [H]
Synonym: Gbem_3607
Alternate gene names: 197119968
Gene position: 4124639-4125109 (Clockwise)
Preceding gene: 197119963
Following gene: 197119969
Centisome position: 89.37
GC content: 61.36
Gene sequence:
>471_bases ATGAAAAAGGCGCTGGTGACGTACTATTCGCAGTCGGGTAACACACGCAAGATGGCCCAGCTGATAGCAGACCACCTCCA GTCCCGCGGCGTTCAGGCCGACCTGATCGCGGTCCAGGACGTGGATATCGACACCCTCCCCTCCTACGACGGCTTCCTGG TCGGCTCCCCCAATTACTTCGGGACCATGGCCTGGCCGGTGAAGAAGTTCATCGACGACAGCATCAAGTACTACAAGAAG TTGAACGGGAAGGCGGCGGCCGCTTTCACCTCGGAGGGGATGATCGGCGGCGGCGGCGACCTGGTGGTCCTCGACATCCT GAAGGCGTTCCTGATTCACGGCTGCGTCGTTCAGGGAATGACCGATGCCGGCCATTTCGGACCGGTCTCCATCGGCGCGC CCGATGAGCGCATAGAGAAGGAAGTGGCGGTCATGGGCGACGCCTTCTGCTCGCTGCTCAACAGGCCGTAA
Upstream 100 bases:
>100_bases CAAGACACTGGGCACCGGAGTTTTGGCTTCCAATAGACGATTTTTGCGGGTAAGGTTAGCATCCGTTCAAGAACCAGATT CCCAATATCGAGGAGGCAAT
Downstream 100 bases:
>100_bases CGCCGGCCGCGCGGTGTCGCACCGTTAACAACATGACAATGGCTTTGCGAAGGTTCAGCGGGGAATTCCGGCAAGAAGAG TCCCCCCTCCCGCAAGGGGA
Product: flavodoxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKKALVTYYSQSGNTRKMAQLIADHLQSRGVQADLIAVQDVDIDTLPSYDGFLVGSPNYFGTMAWPVKKFIDDSIKYYKK LNGKAAAAFTSEGMIGGGGDLVVLDILKAFLIHGCVVQGMTDAGHFGPVSIGAPDERIEKEVAVMGDAFCSLLNRP
Sequences:
>Translated_156_residues MKKALVTYYSQSGNTRKMAQLIADHLQSRGVQADLIAVQDVDIDTLPSYDGFLVGSPNYFGTMAWPVKKFIDDSIKYYKK LNGKAAAAFTSEGMIGGGGDLVVLDILKAFLIHGCVVQGMTDAGHFGPVSIGAPDERIEKEVAVMGDAFCSLLNRP >Mature_156_residues MKKALVTYYSQSGNTRKMAQLIADHLQSRGVQADLIAVQDVDIDTLPSYDGFLVGSPNYFGTMAWPVKKFIDDSIKYYKK LNGKAAAAFTSEGMIGGGGDLVVLDILKAFLIHGCVVQGMTDAGHFGPVSIGAPDERIEKEVAVMGDAFCSLLNRP
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 16792; Mature: 16792
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKALVTYYSQSGNTRKMAQLIADHLQSRGVQADLIAVQDVDIDTLPSYDGFLVGSPNYF CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCCCC GTMAWPVKKFIDDSIKYYKKLNGKAAAAFTSEGMIGGGGDLVVLDILKAFLIHGCVVQGM CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC TDAGHFGPVSIGAPDERIEKEVAVMGDAFCSLLNRP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKALVTYYSQSGNTRKMAQLIADHLQSRGVQADLIAVQDVDIDTLPSYDGFLVGSPNYF CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCCCC GTMAWPVKKFIDDSIKYYKKLNGKAAAAFTSEGMIGGGGDLVVLDILKAFLIHGCVVQGM CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC TDAGHFGPVSIGAPDERIEKEVAVMGDAFCSLLNRP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]