Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119926

Identifier: 197119926

GI number: 197119926

Start: 4077483

End: 4078208

Strand: Direct

Name: 197119926

Synonym: Gbem_3565

Alternate gene names: NA

Gene position: 4077483-4078208 (Clockwise)

Preceding gene: 197119925

Following gene: 197119927

Centisome position: 88.35

GC content: 44.49

Gene sequence:

>726_bases
ATGAAACTGCCTAGGGAGATTTCCCCTTGCCCAATTGTCCAATCTATTATAGAGCTCCGGCTTGCGCCTTCTCCGAATGT
ACCTGCTGATGCTATTTTTGGCCTTGCCTACAGCCGTTTACGTCGAGAATTCCCTTCTGTTGCAAACTTGCCGATCGCTA
ATATCCCAGAACAGCTACGGCAAAGCGATCCCAATCTGGCTTATCAGCCGTTGCACAAGTTCAGCAAAGACAACCTTTCT
ATATCAATTGGCCCAAGGGTGATTGTATTTGCTTGCAGTCCCCCATACGTTGGCTGGGAAGCATTTCACAGAGAGATACG
TAAAGCCATGGAAGCTTTACTAGACATCGAAGGGTATGTCATAAAAATTGAACGTCTGGGTCTGAGAGTAGTCAACATCT
TTGACGGCCCAATTGCCGAAAGCATCATCTTCAATGTCACATCCAGTCCTTTACCGCTTGCAGAATCACAGTTCCATAGC
ACATTTGTCTATCAAGAAGGAGAATTTAAAAACACCCTTCAGATCGGGAACAACGTAGACATCGTCAATGAAGGGAAAGC
GGCAAAAGCCTCAATTCTTGACATTGACACGTTTAAAGAAGATGCTACTGGCGATATTCTTCAGAATTTATGGGATTTAA
TAGACAGGGCACACAGTATAGAGAAGCGTACCTTCTTCTCGCTTTTACGCCCGGAAAAACTAGAACGCTTGAATCCAGTC
TATTAA

Upstream 100 bases:

>100_bases
GGAAGGCTAACGTCCCAAGAGTTTCTTCTTTACAAATACATCGACAGTAGCGTAAATTGCCTGCATTGTGCTCTTGTTAA
ATAAAAAGGACTCAGGAATC

Downstream 100 bases:

>100_bases
ACAAAGGAGGCTAGTATGGCTACGCAATCTGAGTCCCATCCAATGCTGCCGTCGCCCTTTTGTGTGGGGGCACTAGGTGC
TGCTTTGTTGAGCGGTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKLPREISPCPIVQSIIELRLAPSPNVPADAIFGLAYSRLRREFPSVANLPIANIPEQLRQSDPNLAYQPLHKFSKDNLS
ISIGPRVIVFACSPPYVGWEAFHREIRKAMEALLDIEGYVIKIERLGLRVVNIFDGPIAESIIFNVTSSPLPLAESQFHS
TFVYQEGEFKNTLQIGNNVDIVNEGKAAKASILDIDTFKEDATGDILQNLWDLIDRAHSIEKRTFFSLLRPEKLERLNPV
Y

Sequences:

>Translated_241_residues
MKLPREISPCPIVQSIIELRLAPSPNVPADAIFGLAYSRLRREFPSVANLPIANIPEQLRQSDPNLAYQPLHKFSKDNLS
ISIGPRVIVFACSPPYVGWEAFHREIRKAMEALLDIEGYVIKIERLGLRVVNIFDGPIAESIIFNVTSSPLPLAESQFHS
TFVYQEGEFKNTLQIGNNVDIVNEGKAAKASILDIDTFKEDATGDILQNLWDLIDRAHSIEKRTFFSLLRPEKLERLNPV
Y
>Mature_241_residues
MKLPREISPCPIVQSIIELRLAPSPNVPADAIFGLAYSRLRREFPSVANLPIANIPEQLRQSDPNLAYQPLHKFSKDNLS
ISIGPRVIVFACSPPYVGWEAFHREIRKAMEALLDIEGYVIKIERLGLRVVNIFDGPIAESIIFNVTSSPLPLAESQFHS
TFVYQEGEFKNTLQIGNNVDIVNEGKAAKASILDIDTFKEDATGDILQNLWDLIDRAHSIEKRTFFSLLRPEKLERLNPV
Y

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27182; Mature: 27182

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPREISPCPIVQSIIELRLAPSPNVPADAIFGLAYSRLRREFPSVANLPIANIPEQLR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHCCCHHHH
QSDPNLAYQPLHKFSKDNLSISIGPRVIVFACSPPYVGWEAFHREIRKAMEALLDIEGYV
CCCCCCHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEE
IKIERLGLRVVNIFDGPIAESIIFNVTSSPLPLAESQFHSTFVYQEGEFKNTLQIGNNVD
EEEEECCEEEEEECCCHHHHHHHEECCCCCCCCCHHHHHHEEEEECCCCCHHEECCCCCC
IVNEGKAAKASILDIDTFKEDATGDILQNLWDLIDRAHSIEKRTFFSLLRPEKLERLNPV
EEECCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
Y
C
>Mature Secondary Structure
MKLPREISPCPIVQSIIELRLAPSPNVPADAIFGLAYSRLRREFPSVANLPIANIPEQLR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHCCCHHHH
QSDPNLAYQPLHKFSKDNLSISIGPRVIVFACSPPYVGWEAFHREIRKAMEALLDIEGYV
CCCCCCHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEE
IKIERLGLRVVNIFDGPIAESIIFNVTSSPLPLAESQFHSTFVYQEGEFKNTLQIGNNVD
EEEEECCEEEEEECCCHHHHHHHEECCCCCCCCCHHHHHHEEEEECCCCCHHEECCCCCC
IVNEGKAAKASILDIDTFKEDATGDILQNLWDLIDRAHSIEKRTFFSLLRPEKLERLNPV
EEECCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA