Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is aroG-2 [H]
Identifier: 197119911
GI number: 197119911
Start: 4063504
End: 4064529
Strand: Direct
Name: aroG-2 [H]
Synonym: Gbem_3549
Alternate gene names: 197119911
Gene position: 4063504-4064529 (Clockwise)
Preceding gene: 308535376
Following gene: 308535378
Centisome position: 88.05
GC content: 61.5
Gene sequence:
>1026_bases ATGATCGTAGTCATGAAAGCAGGAGCGGCCAAAAAAGAACGCGATGCGGTAACCAAGAGGATCAAGGAACTGGGGTACAC CCCGCACATCATCCATGGCACCACCCGCGACGTCATCGGCGCAGTCGGCGACGAGCGTGGCAAGAGCGTCTTGCAGACGC TGGAGTCGATGCAGGGGGTCGAGAGCGTCGTCCCCATCCTGCAGCCCTACAAGCTCGCCTCCAAGGAAGTTAAGAAAGAG GCGAGCATCGTCCGCATCTCCGACACCCTCGCCATCGGCGGCAAGGAACTGGTGGTGATGGCGGGGCCCTGCTCCGTCGA AAACGAAGAGCAGATCATCGAGTCGGCCATCGCCGTCAAGGCGGCCGGCGCCCAGATGCTGCGCGGCGGCGCCTTCAAGC CCCGCACCTCCCCCTACTCCTTCCAGGGGCTCGAGGAAGAAGGGCTGAAGCTTTTGGCAAAAGCCAGGGAGACAACCGGC CTTCCCTTCGTCACCGAAGTGATCGATCCCGATTCCGTCGATCTCGTCGCCTCCTACTCCGACATGCTCCAGATCGGGGC GCGCAACTCCCAGAACTTTGCCCTGCTGAAGAAGGTCGGGCAGATCGACAAGCCGATCCTCTTGAAGCGCGGCATGTCCA TGACCATCCAGGAGTTCCTGATGAGCGCCGAGTACATCATGAGCGAGGGGAACCAGTCCGTCATTCTCTGCGAGCGCGGC ATCAGGACCTTCGAGACCGCCACCAGGAACACCCTCGACCTCTCCGCCATTCCCGTTTTGAAGTCGAAGACGCATCTTCC CATCGTCATCGACCCCTCCCACGGCACCGGCAATTACCACTACATAGCGCCCATGTCCTTCGCCGCGGTAGCCGCAGGCG CCGACGGACTCATCATCGAAGTGCATCCGGATCCGGAGAAGGCATCCTCCGACGGACCCCAGTCGCTCAAGCCGAAGAAG TTCCAGGCATTGATGGGCAAGCTGCGGCTCTTCGCGGAAGCCGCGGACAAAACACTCGGCGCGTAG
Upstream 100 bases:
>100_bases CCCCTACTTTACGGTTCGCAGCATCATTCTACGAATACTTGAGGCCGGGGGAGAAATCCTTCCGGCCTTTTCTCTTTCGG GGACCAAAAGGGGAGCGAGT
Downstream 100 bases:
>100_bases CCGGGATCTCCATAAGATGGAAGCAGGGATCAGGGGCAGGGAGGGGGGTATCCCCCTCCTGGCCTCCTTCGGGAGAGGCA TAGCAAGCAGCCCAACTCTA
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MIVVMKAGAAKKERDAVTKRIKELGYTPHIIHGTTRDVIGAVGDERGKSVLQTLESMQGVESVVPILQPYKLASKEVKKE ASIVRISDTLAIGGKELVVMAGPCSVENEEQIIESAIAVKAAGAQMLRGGAFKPRTSPYSFQGLEEEGLKLLAKARETTG LPFVTEVIDPDSVDLVASYSDMLQIGARNSQNFALLKKVGQIDKPILLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG IRTFETATRNTLDLSAIPVLKSKTHLPIVIDPSHGTGNYHYIAPMSFAAVAAGADGLIIEVHPDPEKASSDGPQSLKPKK FQALMGKLRLFAEAADKTLGA
Sequences:
>Translated_341_residues MIVVMKAGAAKKERDAVTKRIKELGYTPHIIHGTTRDVIGAVGDERGKSVLQTLESMQGVESVVPILQPYKLASKEVKKE ASIVRISDTLAIGGKELVVMAGPCSVENEEQIIESAIAVKAAGAQMLRGGAFKPRTSPYSFQGLEEEGLKLLAKARETTG LPFVTEVIDPDSVDLVASYSDMLQIGARNSQNFALLKKVGQIDKPILLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG IRTFETATRNTLDLSAIPVLKSKTHLPIVIDPSHGTGNYHYIAPMSFAAVAAGADGLIIEVHPDPEKASSDGPQSLKPKK FQALMGKLRLFAEAADKTLGA >Mature_341_residues MIVVMKAGAAKKERDAVTKRIKELGYTPHIIHGTTRDVIGAVGDERGKSVLQTLESMQGVESVVPILQPYKLASKEVKKE ASIVRISDTLAIGGKELVVMAGPCSVENEEQIIESAIAVKAAGAQMLRGGAFKPRTSPYSFQGLEEEGLKLLAKARETTG LPFVTEVIDPDSVDLVASYSDMLQIGARNSQNFALLKKVGQIDKPILLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG IRTFETATRNTLDLSAIPVLKSKTHLPIVIDPSHGTGNYHYIAPMSFAAVAAGADGLIIEVHPDPEKASSDGPQSLKPKK FQALMGKLRLFAEAADKTLGA
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=206, Percent_Identity=27.6699029126214, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 36702; Mature: 36702
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVMKAGAAKKERDAVTKRIKELGYTPHIIHGTTRDVIGAVGDERGKSVLQTLESMQGV CEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHH ESVVPILQPYKLASKEVKKEASIVRISDTLAIGGKELVVMAGPCSVENEEQIIESAIAVK HHHHHHHCCHHHHHHHHHHHCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHH AAGAQMLRGGAFKPRTSPYSFQGLEEEGLKLLAKARETTGLPFVTEVIDPDSVDLVASYS HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH DMLQIGARNSQNFALLKKVGQIDKPILLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG HHHHHCCCCCCCHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC IRTFETATRNTLDLSAIPVLKSKTHLPIVIDPSHGTGNYHYIAPMSFAAVAAGADGLIIE CHHHHHHCCCCCCCEECCEECCCCCCCEEEECCCCCCCEEEECCHHHHHHHCCCCCEEEE VHPDPEKASSDGPQSLKPKKFQALMGKLRLFAEAADKTLGA ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVVMKAGAAKKERDAVTKRIKELGYTPHIIHGTTRDVIGAVGDERGKSVLQTLESMQGV CEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHH ESVVPILQPYKLASKEVKKEASIVRISDTLAIGGKELVVMAGPCSVENEEQIIESAIAVK HHHHHHHCCHHHHHHHHHHHCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHH AAGAQMLRGGAFKPRTSPYSFQGLEEEGLKLLAKARETTGLPFVTEVIDPDSVDLVASYS HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH DMLQIGARNSQNFALLKKVGQIDKPILLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG HHHHHCCCCCCCHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC IRTFETATRNTLDLSAIPVLKSKTHLPIVIDPSHGTGNYHYIAPMSFAAVAAGADGLIIE CHHHHHHCCCCCCCEECCEECCCCCCCEEEECCCCCCCEEEECCHHHHHHHCCCCCEEEE VHPDPEKASSDGPQSLKPKKFQALMGKLRLFAEAADKTLGA ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]