Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119886

Identifier: 197119886

GI number: 197119886

Start: 4036068

End: 4037180

Strand: Direct

Name: 197119886

Synonym: Gbem_3524

Alternate gene names: NA

Gene position: 4036068-4037180 (Clockwise)

Preceding gene: 197119885

Following gene: 308535374

Centisome position: 87.45

GC content: 48.34

Gene sequence:

>1113_bases
ATGAGAACGAATATAGACAAAGTCCTGCTATGTTTCTTTATTGCAATGGTGCTTAGTGTTATGGGTTGTGGAGGCAGCAG
TTCGACAACCCCTGCAGCGACTACTGCTACCGGCAAGTTCATAGATGCTCCGGTTGAGGGACTAAAATACGTCTCTGGAG
GACAAAATGGATTTACCGGACCTAACGGAGAATTTACTTACGAGGTTGGACAATCGGTTTCTTTTTCTGTTGGTGGCGTA
GTTGTCGGCCGAGCGGCTGGTGCCAGCATTATTACTCCGATTGAGTTGGTAAAGACAGCGGCTCCAGGAACTACAGTTAC
GGCCAGCACGCCTGCTGTTGTACAGATTGCTAGATTTCTTTTGACTGCTAGCAGCTTGACTTCAACAGGTATTAAAATAG
ATCCTGCAGTAACAACAGCAAGTTCATCACAAAACATCAATCTATCAACCGCTTCCGATTTAACCTTCACAACATTTATC
AACCAAATTGCAGCGGCGGCTGGGAGCCGTACAGTGACTACTACAACCGATGCTCAGGCCCACATCACCGCTAGCGTCAA
TGGTCTTGCTTCCGGGACCATTGTTTTGCCTCCCGCATCATCTACTGGTGGCGGCAATACTCCACCGAACACAGCACCAG
GCTCCGCTAAATCAACAGTGACAAAAACTTCTGCTTTACCTGTTGGTAACACTGATTGTCCATTTGGCGGGATCATAGTT
ACATCAGGCATTGACACAAATGGCAATGGTGTTCTCGACGTATCAGAAGTGAGTTCATCTCAAGCGGTTTGTAACGGTGC
TACTGGTGCTACTGGTGCTACTGGTGCTACTGGTGCTACTGGTGCTACTGGTGCTACCGGGCCACAGGGCGGTACGACTG
GCATGTTTGTGGGGGCAACTGCCGTTGTCTGCCATAATTTGAGTCAGTGTGCTTGTTCTGGAGCGCAAGTAGTTAAGGCG
CTTGGCGGTATGTGGTGTGACGGATCTGCGGCAATTAAAGAGTCGGCGATAGTGCAGAACAATCCAAGTGCATGGGAAGG
AATTTGTATAGATCTGGTTACCACTACTTCGTTTGCTCCTTCAGGGATAGTTATTTCTTGCGTAGATCCCTAA

Upstream 100 bases:

>100_bases
CGTCAACACCCTCAATAACATATGTAGAACAACGAGATAAAGACCCTATCTTGGTTGATGTTCATTCGATTCCTCAGGGT
TGCAGTAAGGGAAGGAAAAC

Downstream 100 bases:

>100_bases
ATCAAACGTGGTGAATGTTTTTTAAACACAGAAAGACATTCACACGAGACCTTTCAAACTAACAAAAACGTCGTTGGGCC
ATTTATTACAAGGCTTAACG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MRTNIDKVLLCFFIAMVLSVMGCGGSSSTTPAATTATGKFIDAPVEGLKYVSGGQNGFTGPNGEFTYEVGQSVSFSVGGV
VVGRAAGASIITPIELVKTAAPGTTVTASTPAVVQIARFLLTASSLTSTGIKIDPAVTTASSSQNINLSTASDLTFTTFI
NQIAAAAGSRTVTTTTDAQAHITASVNGLASGTIVLPPASSTGGGNTPPNTAPGSAKSTVTKTSALPVGNTDCPFGGIIV
TSGIDTNGNGVLDVSEVSSSQAVCNGATGATGATGATGATGATGATGPQGGTTGMFVGATAVVCHNLSQCACSGAQVVKA
LGGMWCDGSAAIKESAIVQNNPSAWEGICIDLVTTTSFAPSGIVISCVDP

Sequences:

>Translated_370_residues
MRTNIDKVLLCFFIAMVLSVMGCGGSSSTTPAATTATGKFIDAPVEGLKYVSGGQNGFTGPNGEFTYEVGQSVSFSVGGV
VVGRAAGASIITPIELVKTAAPGTTVTASTPAVVQIARFLLTASSLTSTGIKIDPAVTTASSSQNINLSTASDLTFTTFI
NQIAAAAGSRTVTTTTDAQAHITASVNGLASGTIVLPPASSTGGGNTPPNTAPGSAKSTVTKTSALPVGNTDCPFGGIIV
TSGIDTNGNGVLDVSEVSSSQAVCNGATGATGATGATGATGATGATGPQGGTTGMFVGATAVVCHNLSQCACSGAQVVKA
LGGMWCDGSAAIKESAIVQNNPSAWEGICIDLVTTTSFAPSGIVISCVDP
>Mature_370_residues
MRTNIDKVLLCFFIAMVLSVMGCGGSSSTTPAATTATGKFIDAPVEGLKYVSGGQNGFTGPNGEFTYEVGQSVSFSVGGV
VVGRAAGASIITPIELVKTAAPGTTVTASTPAVVQIARFLLTASSLTSTGIKIDPAVTTASSSQNINLSTASDLTFTTFI
NQIAAAAGSRTVTTTTDAQAHITASVNGLASGTIVLPPASSTGGGNTPPNTAPGSAKSTVTKTSALPVGNTDCPFGGIIV
TSGIDTNGNGVLDVSEVSSSQAVCNGATGATGATGATGATGATGATGPQGGTTGMFVGATAVVCHNLSQCACSGAQVVKA
LGGMWCDGSAAIKESAIVQNNPSAWEGICIDLVTTTSFAPSGIVISCVDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36105; Mature: 36105

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNIDKVLLCFFIAMVLSVMGCGGSSSTTPAATTATGKFIDAPVEGLKYVSGGQNGFTG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEECCCHHHHEECCCCCCCCCC
PNGEFTYEVGQSVSFSVGGVVVGRAAGASIITPIELVKTAAPGTTVTASTPAVVQIARFL
CCCCEEEECCCCEEEEECCEEEECCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHH
LTASSLTSTGIKIDPAVTTASSSQNINLSTASDLTFTTFINQIAAAAGSRTVTTTTDAQA
HHHHHHHCCCEEECCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCE
HITASVNGLASGTIVLPPASSTGGGNTPPNTAPGSAKSTVTKTSALPVGNTDCPFGGIIV
EEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE
TSGIDTNGNGVLDVSEVSSSQAVCNGATGATGATGATGATGATGATGPQGGTTGMFVGAT
ECCCCCCCCCEEEHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH
AVVCHNLSQCACSGAQVVKALGGMWCDGSAAIKESAIVQNNPSAWEGICIDLVTTTSFAP
HHHHHCHHHHHCCHHHHHHHHCCCCCCCCHHHHHCEEECCCCCCCCCEEEEEEEECCCCC
SGIVISCVDP
CCEEEEECCC
>Mature Secondary Structure
MRTNIDKVLLCFFIAMVLSVMGCGGSSSTTPAATTATGKFIDAPVEGLKYVSGGQNGFTG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEECCCHHHHEECCCCCCCCCC
PNGEFTYEVGQSVSFSVGGVVVGRAAGASIITPIELVKTAAPGTTVTASTPAVVQIARFL
CCCCEEEECCCCEEEEECCEEEECCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHH
LTASSLTSTGIKIDPAVTTASSSQNINLSTASDLTFTTFINQIAAAAGSRTVTTTTDAQA
HHHHHHHCCCEEECCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCE
HITASVNGLASGTIVLPPASSTGGGNTPPNTAPGSAKSTVTKTSALPVGNTDCPFGGIIV
EEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE
TSGIDTNGNGVLDVSEVSSSQAVCNGATGATGATGATGATGATGATGPQGGTTGMFVGAT
ECCCCCCCCCEEEHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH
AVVCHNLSQCACSGAQVVKALGGMWCDGSAAIKESAIVQNNPSAWEGICIDLVTTTSFAP
HHHHHCHHHHHCCHHHHHHHHCCCCCCCCHHHHHCEEECCCCCCCCCEEEEEEEECCCCC
SGIVISCVDP
CCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA