Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197119884
Identifier: 197119884
GI number: 197119884
Start: 4031090
End: 4032301
Strand: Direct
Name: 197119884
Synonym: Gbem_3522
Alternate gene names: NA
Gene position: 4031090-4032301 (Clockwise)
Preceding gene: 197119883
Following gene: 197119885
Centisome position: 87.34
GC content: 62.87
Gene sequence:
>1212_bases ATGAGATTCTTCGCCAACCTGTTCCTGCTCCTGTTCATCGCCGACGGGAGCCTTTCGCTTTTGGACGAACTGGCCTCGCT CCTATTCCCGCTGGTCCCCCTTTCCGGGCTGCGCGGCTTTCTGGCCAACGCCGTCATACTGATCGCGATACCGCTCTACC TGGGCCTCGGCATCGACCGGCGGCTGCCCAAACGGCTCTTCCTACCCCTGATCCTGTTCGTATTCTGGTGCCCGCTCTCC ATCTGGTTCTTCCCCGCCCTCGGCGCCTTCAAGCTGTACGGCCTGATCATGGCGGCGCTGCAGGTAGGGCTCGGCACCTT CCTCATCTCCCGGTTCAATGAGAACCCGGCGGCGCCGCTTACCCTTCCCCCCACGCTCTTCGAGGCGCCTTACTTCGACC TGCGCAACACACTGGTGTTCGTCGGCGTGAACATCTTCGTCCTCCCGCTGGCCCTGGCGACGGCGGCGCTCTTCGCGGCC AACTCCTACGCCACCGAGGCCACCGGCGGCTTCATGAACGTGTCCCCCCGGGGTCTCTACATGAGCGAGCGCACCTACCG GCGCGGCGACCGCACCGTCAAACTCGCAGCCATGATCCACATCGGCGAGAAGGATTATTACGACGAGGTGGCGCGGCTGG TTCCTGCGGGGAACACCATAGTGCTGGCCGAAGGGGTCACCGACGAGAAGGGAAAGCTCAAAAACAAGTTCGATTACCAC CAGGTGGCGAACCTGCTGGGGCTCGCCTCGCAGGAAAAGCTCCTCTTCAAGGGGAGGATGATCGAACCCAACGAGCTGCA AACCCCGGGGAAGCCGGAGGGAAAGGCACAGGCGGGGCCGGATATCCTGCGGGCGGACGTGGACCTGAGCGCCTTCCGCC CGGAGACCATGATGCTTCTGGACGCCATGGGGAAGCACTTGCGCGAGAACCCTTCCGCCCTCGACGGCCTGCTGAAGCTG AACCGGTGGGCGGAGAAAAACATCACGCCCGCCATGTACGCCGTGATCATGGACGACATCCTGCAGCGCAGGAACAAGGT GGTGGTTCAGTACCTGGACCAGGCGCTGAAGCGCTACCAGACCGTGGTGATCCCCTGGGGCGCCCTGCACATGAAAGGTA TCGAAGCAGAGGTTCTAGCGCGCGGGTTCGTGCTGCAAGGGGAACAAAAGCGGCTGAGCGTCGACTTCAAGCGCGTGGCG TTACACAATTAG
Upstream 100 bases:
>100_bases GCCCGCTCACCCGCTTTTGCACCTTCCTCGCGGCAGGCCGCCCTTGACCCTGACCCTGACCCTGACCCTGACCCTTACCC AGCACCCACAGGACCTATAG
Downstream 100 bases:
>100_bases AGTACGTTCAGACCCTAGCACTATTGGAATAACAAAGTTTCTCGCACTGCATGTAACACATGCAGACCGCCAAATAGTGA TTTCTGAACATCTGTCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MRFFANLFLLLFIADGSLSLLDELASLLFPLVPLSGLRGFLANAVILIAIPLYLGLGIDRRLPKRLFLPLILFVFWCPLS IWFFPALGAFKLYGLIMAALQVGLGTFLISRFNENPAAPLTLPPTLFEAPYFDLRNTLVFVGVNIFVLPLALATAALFAA NSYATEATGGFMNVSPRGLYMSERTYRRGDRTVKLAAMIHIGEKDYYDEVARLVPAGNTIVLAEGVTDEKGKLKNKFDYH QVANLLGLASQEKLLFKGRMIEPNELQTPGKPEGKAQAGPDILRADVDLSAFRPETMMLLDAMGKHLRENPSALDGLLKL NRWAEKNITPAMYAVIMDDILQRRNKVVVQYLDQALKRYQTVVIPWGALHMKGIEAEVLARGFVLQGEQKRLSVDFKRVA LHN
Sequences:
>Translated_403_residues MRFFANLFLLLFIADGSLSLLDELASLLFPLVPLSGLRGFLANAVILIAIPLYLGLGIDRRLPKRLFLPLILFVFWCPLS IWFFPALGAFKLYGLIMAALQVGLGTFLISRFNENPAAPLTLPPTLFEAPYFDLRNTLVFVGVNIFVLPLALATAALFAA NSYATEATGGFMNVSPRGLYMSERTYRRGDRTVKLAAMIHIGEKDYYDEVARLVPAGNTIVLAEGVTDEKGKLKNKFDYH QVANLLGLASQEKLLFKGRMIEPNELQTPGKPEGKAQAGPDILRADVDLSAFRPETMMLLDAMGKHLRENPSALDGLLKL NRWAEKNITPAMYAVIMDDILQRRNKVVVQYLDQALKRYQTVVIPWGALHMKGIEAEVLARGFVLQGEQKRLSVDFKRVA LHN >Mature_403_residues MRFFANLFLLLFIADGSLSLLDELASLLFPLVPLSGLRGFLANAVILIAIPLYLGLGIDRRLPKRLFLPLILFVFWCPLS IWFFPALGAFKLYGLIMAALQVGLGTFLISRFNENPAAPLTLPPTLFEAPYFDLRNTLVFVGVNIFVLPLALATAALFAA NSYATEATGGFMNVSPRGLYMSERTYRRGDRTVKLAAMIHIGEKDYYDEVARLVPAGNTIVLAEGVTDEKGKLKNKFDYH QVANLLGLASQEKLLFKGRMIEPNELQTPGKPEGKAQAGPDILRADVDLSAFRPETMMLLDAMGKHLRENPSALDGLLKL NRWAEKNITPAMYAVIMDDILQRRNKVVVQYLDQALKRYQTVVIPWGALHMKGIEAEVLARGFVLQGEQKRLSVDFKRVA LHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44895; Mature: 44895
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFANLFLLLFIADGSLSLLDELASLLFPLVPLSGLRGFLANAVILIAIPLYLGLGIDR CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLPKRLFLPLILFVFWCPLSIWFFPALGAFKLYGLIMAALQVGLGTFLISRFNENPAAPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TLPPTLFEAPYFDLRNTLVFVGVNIFVLPLALATAALFAANSYATEATGGFMNVSPRGLY CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEE MSERTYRRGDRTVKLAAMIHIGEKDYYDEVARLVPAGNTIVLAEGVTDEKGKLKNKFDYH ECCHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHH QVANLLGLASQEKLLFKGRMIEPNELQTPGKPEGKAQAGPDILRADVDLSAFRPETMMLL HHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCHHHHHH DAMGKHLRENPSALDGLLKLNRWAEKNITPAMYAVIMDDILQRRNKVVVQYLDQALKRYQ HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TVVIPWGALHMKGIEAEVLARGFVLQGEQKRLSVDFKRVALHN EEEEECCHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRFFANLFLLLFIADGSLSLLDELASLLFPLVPLSGLRGFLANAVILIAIPLYLGLGIDR CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLPKRLFLPLILFVFWCPLSIWFFPALGAFKLYGLIMAALQVGLGTFLISRFNENPAAPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TLPPTLFEAPYFDLRNTLVFVGVNIFVLPLALATAALFAANSYATEATGGFMNVSPRGLY CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEE MSERTYRRGDRTVKLAAMIHIGEKDYYDEVARLVPAGNTIVLAEGVTDEKGKLKNKFDYH ECCHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHH QVANLLGLASQEKLLFKGRMIEPNELQTPGKPEGKAQAGPDILRADVDLSAFRPETMMLL HHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCHHHHHH DAMGKHLRENPSALDGLLKLNRWAEKNITPAMYAVIMDDILQRRNKVVVQYLDQALKRYQ HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TVVIPWGALHMKGIEAEVLARGFVLQGEQKRLSVDFKRVALHN EEEEECCHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA