| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is pgi
Identifier: 197119779
GI number: 197119779
Start: 3933014
End: 3934606
Strand: Direct
Name: pgi
Synonym: Gbem_3417
Alternate gene names: 197119779
Gene position: 3933014-3934606 (Clockwise)
Preceding gene: 197119771
Following gene: 197119780
Centisome position: 85.22
GC content: 63.53
Gene sequence:
>1593_bases ATGCAGAAACAGCAGCTTTGGGAGCGGTACAAGAACCTGCTCTACCATGACGCCGAACTAGAGCTGAGCGTCGACACCAG CCGTATCGATTTCCCGGAGGGGTTCCTGGAGAAGATGGACCCGCGACTGCAGCAGGCGTACCAAGAGATGGAAGCGCTGG AACAAGGTGCAGTCGCCAACCCGGACGAACATCGGATGGTGGGGCACTACTGGCTCAGGGCTCCCGAACTGGCACCGGAG GCGACCCTTGCCGAGGAGATAACGTCGACACTGGCCGCTATCGAGGCGTTTGCCTCCTCAGTGCACGGGGGGAACATCGC CGCCCCCGACGGCCACCGCTTCACCGACCTTTTGATCATCGGCATCGGAGGCTCCGCGCTGGGGCCTCAGTTCCTCGCCG ACAGCCTGGGAGGGCCCAAGGATCTCCTGCGGATCTGGTTCTTCGACAACACCGACCCGGACGGTATGGACAAGGTCCTC TCCGGGATCGGCGCCGCTCTGAAACAGACCCTGGTGGTGGTCATATCCAAGAGCGGCGGCACCAAAGAGACCCGCAACGG AATGCTGGAGGCGTGCCAGGCGTTCGAGCGCGCCGGGCTGCATTTCGCCGGGCACGCCGTCGCCGTAACCGGCAGCGGCA GCGAGCTGGACAGGACTGCATCCAGGGAAAACTGGCTCGGGGTCTTCCCGATGTGGGACTGGGTCGGCGGGCGCACCTCG GTCACCTCAGCGGTGGGGCTCCTCCCCGCTGCCCTGCAAGGGATCGACGTGGACCGGTTGCTCGCCGGAGCGCGCGCCTG CGACCAAAAAACCCGTTCCCGGGTGACACGGGAAAACCCCGCCGCACTCCTAGCCCTCTCCTGGTTCCACGCCACCCAGG GGAAAGGCACCCGTGACATGGTGCTGCTCCCCTACAAGGACAGGCTTCTTTTGTTCTCCCGCTACCTGCAGCAGCTCATC ATGGAGTCCCTCGGCAAGGGGTTGGACCGCGACGGGAAAGAGGTGCTGCAGGGGATCGCCGTTTACGGCAACAAGGGCTC CACCGACCAGCACGCCTACGTGCAGCAGCTGCGGGAAGGGGTGCACAACTTCTTCGTCACCTTCATCGAGGTGCTCAAGG ACCGCCAGGGCCCATCCATGGAAGTGGAGCCTGGTGCGACCTCCGGCGATTATCTCTCGGGCTTTTTCCAGGGAACGCGA TCCGCGCTCTATGAAAAAGGACGGGAATCGGTTACTATCACCGTCCGCGAGCTCTCCCCTGCAAGCATCGGTGCCCTTAT CGCCCTTTACGAGCGCGCGGTGGGGCTGTACGCCTCGCTCGTCAATGTTAACGCCTACCACCAGCCGGGAGTCGAGGCAG GGAAGGAGGCCGCCGGCGCCGTGCTCAAACTGCAGGGGGAGATCATGGAGTTGCTCAGGCGTCAGCCGAACCGGGACTTC ACCGGTGAGGAGATGGCGCTGGCACTGGCGCGCCCGGAAGAGGTGGAGACCACCTTCATGATCTTGAGGCACCTTGCCGC CAACGGCGACCACGGGGTGAGCGTCACCGAAAAGGACAAGATCTGGGAAAACAAGTACCGCAGCAAAGATTAG
Upstream 100 bases:
>100_bases CCGCTACGCAGACTTGAATAAAAACTAATACATGCTATCATCCCCCGACGCACATGAGAATCGACCTGCCACCAGCCTAA CCAAACGCAGCGGAGGGGAC
Downstream 100 bases:
>100_bases CAAGGTAGGGGAACAGATGAAGACGGTAGATCTGAGAAGCGACACGGTGACATCGCCGTCGCAGGCGATGCGTCGGGAAA TGGCGAATGCCCCGGTAGGA
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MQKQQLWERYKNLLYHDAELELSVDTSRIDFPEGFLEKMDPRLQQAYQEMEALEQGAVANPDEHRMVGHYWLRAPELAPE ATLAEEITSTLAAIEAFASSVHGGNIAAPDGHRFTDLLIIGIGGSALGPQFLADSLGGPKDLLRIWFFDNTDPDGMDKVL SGIGAALKQTLVVVISKSGGTKETRNGMLEACQAFERAGLHFAGHAVAVTGSGSELDRTASRENWLGVFPMWDWVGGRTS VTSAVGLLPAALQGIDVDRLLAGARACDQKTRSRVTRENPAALLALSWFHATQGKGTRDMVLLPYKDRLLLFSRYLQQLI MESLGKGLDRDGKEVLQGIAVYGNKGSTDQHAYVQQLREGVHNFFVTFIEVLKDRQGPSMEVEPGATSGDYLSGFFQGTR SALYEKGRESVTITVRELSPASIGALIALYERAVGLYASLVNVNAYHQPGVEAGKEAAGAVLKLQGEIMELLRRQPNRDF TGEEMALALARPEEVETTFMILRHLAANGDHGVSVTEKDKIWENKYRSKD
Sequences:
>Translated_530_residues MQKQQLWERYKNLLYHDAELELSVDTSRIDFPEGFLEKMDPRLQQAYQEMEALEQGAVANPDEHRMVGHYWLRAPELAPE ATLAEEITSTLAAIEAFASSVHGGNIAAPDGHRFTDLLIIGIGGSALGPQFLADSLGGPKDLLRIWFFDNTDPDGMDKVL SGIGAALKQTLVVVISKSGGTKETRNGMLEACQAFERAGLHFAGHAVAVTGSGSELDRTASRENWLGVFPMWDWVGGRTS VTSAVGLLPAALQGIDVDRLLAGARACDQKTRSRVTRENPAALLALSWFHATQGKGTRDMVLLPYKDRLLLFSRYLQQLI MESLGKGLDRDGKEVLQGIAVYGNKGSTDQHAYVQQLREGVHNFFVTFIEVLKDRQGPSMEVEPGATSGDYLSGFFQGTR SALYEKGRESVTITVRELSPASIGALIALYERAVGLYASLVNVNAYHQPGVEAGKEAAGAVLKLQGEIMELLRRQPNRDF TGEEMALALARPEEVETTFMILRHLAANGDHGVSVTEKDKIWENKYRSKD >Mature_530_residues MQKQQLWERYKNLLYHDAELELSVDTSRIDFPEGFLEKMDPRLQQAYQEMEALEQGAVANPDEHRMVGHYWLRAPELAPE ATLAEEITSTLAAIEAFASSVHGGNIAAPDGHRFTDLLIIGIGGSALGPQFLADSLGGPKDLLRIWFFDNTDPDGMDKVL SGIGAALKQTLVVVISKSGGTKETRNGMLEACQAFERAGLHFAGHAVAVTGSGSELDRTASRENWLGVFPMWDWVGGRTS VTSAVGLLPAALQGIDVDRLLAGARACDQKTRSRVTRENPAALLALSWFHATQGKGTRDMVLLPYKDRLLLFSRYLQQLI MESLGKGLDRDGKEVLQGIAVYGNKGSTDQHAYVQQLREGVHNFFVTFIEVLKDRQGPSMEVEPGATSGDYLSGFFQGTR SALYEKGRESVTITVRELSPASIGALIALYERAVGLYASLVNVNAYHQPGVEAGKEAAGAVLKLQGEIMELLRRQPNRDF TGEEMALALARPEEVETTFMILRHLAANGDHGVSVTEKDKIWENKYRSKD
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=456, Percent_Identity=28.5087719298246, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI296080693, Length=375, Percent_Identity=27.7333333333333, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1790457, Length=460, Percent_Identity=30.2173913043478, Blast_Score=166, Evalue=5e-42, Organism=Caenorhabditis elegans, GI71996708, Length=441, Percent_Identity=28.5714285714286, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71996703, Length=441, Percent_Identity=28.5714285714286, Blast_Score=142, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6319673, Length=453, Percent_Identity=28.0353200883002, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI24651916, Length=496, Percent_Identity=28.6290322580645, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24651914, Length=496, Percent_Identity=28.6290322580645, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI17737445, Length=496, Percent_Identity=28.6290322580645, Blast_Score=147, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_GEOBB (B5EBB8)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002140206.1 - ProteinModelPortal: B5EBB8 - SMR: B5EBB8 - GeneID: 6780279 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_3417 - HOGENOM: HBG285902 - OMA: RTSITSA - ProtClustDB: PRK14096 - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR018189 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 58162; Mature: 58162
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 351-351 ACT_SITE 455-455
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKQQLWERYKNLLYHDAELELSVDTSRIDFPEGFLEKMDPRLQQAYQEMEALEQGAVAN CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCC PDEHRMVGHYWLRAPELAPEATLAEEITSTLAAIEAFASSVHGGNIAAPDGHRFTDLLII CHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE GIGGSALGPQFLADSLGGPKDLLRIWFFDNTDPDGMDKVLSGIGAALKQTLVVVISKSGG ECCCCCCCHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEECCCC TKETRNGMLEACQAFERAGLHFAGHAVAVTGSGSELDRTASRENWLGVFPMWDWVGGRTS CCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHCCCCCEEECCHHHHCCCCHH VTSAVGLLPAALQGIDVDRLLAGARACDQKTRSRVTRENPAALLALSWFHATQGKGTRDM HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCE VLLPYKDRLLLFSRYLQQLIMESLGKGLDRDGKEVLQGIAVYGNKGSTDQHAYVQQLREG EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH VHNFFVTFIEVLKDRQGPSMEVEPGATSGDYLSGFFQGTRSALYEKGRESVTITVRELSP HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC ASIGALIALYERAVGLYASLVNVNAYHQPGVEAGKEAAGAVLKLQGEIMELLRRQPNRDF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHCHHHEEHHHHHHHHHCCCCCCC TGEEMALALARPEEVETTFMILRHLAANGDHGVSVTEKDKIWENKYRSKD CCHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MQKQQLWERYKNLLYHDAELELSVDTSRIDFPEGFLEKMDPRLQQAYQEMEALEQGAVAN CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCC PDEHRMVGHYWLRAPELAPEATLAEEITSTLAAIEAFASSVHGGNIAAPDGHRFTDLLII CHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE GIGGSALGPQFLADSLGGPKDLLRIWFFDNTDPDGMDKVLSGIGAALKQTLVVVISKSGG ECCCCCCCHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEECCCC TKETRNGMLEACQAFERAGLHFAGHAVAVTGSGSELDRTASRENWLGVFPMWDWVGGRTS CCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHCCCCCEEECCHHHHCCCCHH VTSAVGLLPAALQGIDVDRLLAGARACDQKTRSRVTRENPAALLALSWFHATQGKGTRDM HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCE VLLPYKDRLLLFSRYLQQLIMESLGKGLDRDGKEVLQGIAVYGNKGSTDQHAYVQQLREG EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH VHNFFVTFIEVLKDRQGPSMEVEPGATSGDYLSGFFQGTRSALYEKGRESVTITVRELSP HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC ASIGALIALYERAVGLYASLVNVNAYHQPGVEAGKEAAGAVLKLQGEIMELLRRQPNRDF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHCHHHEEHHHHHHHHHCCCCCCC TGEEMALALARPEEVETTFMILRHLAANGDHGVSVTEKDKIWENKYRSKD CCHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA