| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119749
Identifier: 197119749
GI number: 197119749
Start: 3892045
End: 3892548
Strand: Direct
Name: 197119749
Synonym: Gbem_3385
Alternate gene names: NA
Gene position: 3892045-3892548 (Clockwise)
Preceding gene: 197119748
Following gene: 197119751
Centisome position: 84.33
GC content: 51.98
Gene sequence:
>504_bases ATGAATAAGGGAATTTTGCAAAGTCTTAAGCAATTGGCCGGAGTGGCAGTACTGGCAGTGGCGACGTTTTTTTCGACCGC GGCTTTAGCTCAAAGCGACCTGGATCTGGACAAGGCAGTGAAGGTGGGGACCGGAAAGACCATGGTGATAGAGTTCACCG ATCCCGACTGTCCCTTCTGCAGGAAAGCCGAAGCGTACTTCCAGAAGAGAAACGACGTCACCCGTTACATCTTCTTCATA CCCCTGGCAAAGCACCCCGCGTCCAAGGGCAAGGTGCAGTACATACTTTCCGCAAGCGACAAGGTCAAAGCGATGTGTGA AGTAACGTCCGACGATTTCGACACCAAGAAGCTGTCGCAGATCACGGCCAAAGGGAAGAAACTGCAAAAAGAGCACGAAG AGATCGCCCGTGCCAACAAGATGACCTCAACCCCCACCTTTGTCATCTACGGCAGGATCATAGAAGGCTTCGACCTGAAA AAACTGGAGCCGCTGCTGAAATAG
Upstream 100 bases:
>100_bases TGGTGCCGCAGGGGGCCCGAGTCGGCCCGGGTCGACGAACTGAGCGAGCAGAAAGGGGAGTACGCCGGGGAGTTCACCGG TTTCGAAATAAGGGGCGACG
Downstream 100 bases:
>100_bases CCGCGGCTCCAGTGAACAGATTCAGGCAGGTTTTAGTTGTCAATTATCCATTGTCAATTGTCAATTGCCTTTAATAGGCC ACCCCTTCTCATACCCCTCC
Product: protein disulfide bond isomerase
Products: NA
Alternate protein names: Protein-Disulfide Isomerase-Like Protein; Protein Disulfide Bond Isomerase DsbC/DsbG-Like Protein; ThiolDisulfide Interchange Protein; Disulfide Bond Isomerase DsbC/G-Like Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNKGILQSLKQLAGVAVLAVATFFSTAALAQSDLDLDKAVKVGTGKTMVIEFTDPDCPFCRKAEAYFQKRNDVTRYIFFI PLAKHPASKGKVQYILSASDKVKAMCEVTSDDFDTKKLSQITAKGKKLQKEHEEIARANKMTSTPTFVIYGRIIEGFDLK KLEPLLK
Sequences:
>Translated_167_residues MNKGILQSLKQLAGVAVLAVATFFSTAALAQSDLDLDKAVKVGTGKTMVIEFTDPDCPFCRKAEAYFQKRNDVTRYIFFI PLAKHPASKGKVQYILSASDKVKAMCEVTSDDFDTKKLSQITAKGKKLQKEHEEIARANKMTSTPTFVIYGRIIEGFDLK KLEPLLK >Mature_167_residues MNKGILQSLKQLAGVAVLAVATFFSTAALAQSDLDLDKAVKVGTGKTMVIEFTDPDCPFCRKAEAYFQKRNDVTRYIFFI PLAKHPASKGKVQYILSASDKVKAMCEVTSDDFDTKKLSQITAKGKKLQKEHEEIARANKMTSTPTFVIYGRIIEGFDLK KLEPLLK
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18554; Mature: 18554
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGILQSLKQLAGVAVLAVATFFSTAALAQSDLDLDKAVKVGTGKTMVIEFTDPDCPFC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCEEEEEECCCCCCHH RKAEAYFQKRNDVTRYIFFIPLAKHPASKGKVQYILSASDKVKAMCEVTSDDFDTKKLSQ HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHH ITAKGKKLQKEHEEIARANKMTSTPTFVIYGRIIEGFDLKKLEPLLK HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHCC >Mature Secondary Structure MNKGILQSLKQLAGVAVLAVATFFSTAALAQSDLDLDKAVKVGTGKTMVIEFTDPDCPFC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCEEEEEECCCCCCHH RKAEAYFQKRNDVTRYIFFIPLAKHPASKGKVQYILSASDKVKAMCEVTSDDFDTKKLSQ HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHH ITAKGKKLQKEHEEIARANKMTSTPTFVIYGRIIEGFDLKKLEPLLK HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA