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The map label for this gene is rpmB

Identifier: 197119577

GI number: 197119577

Start: 3699566

End: 3699757

Strand: Direct

Name: rpmB

Synonym: Gbem_3209

Alternate gene names: 197119577

Gene position: 3699566-3699757 (Clockwise)

Preceding gene: 197119575

Following gene: 197119585

Centisome position: 80.16

GC content: 54.17

Gene sequence:

>192_bases
ATGTCCAGAATATGCGAGATTTGCGGTAAAGGCCCTAGCTTCGGGAATAATGTCAGCCACGCTAACAACAAGACCAGCAA
AATCTGGCGCCCGAACCTGCAGAAGATCAAGGCCGTTAAAAACGGTACCGTCAGGAGCATCAAGGTCTGCACCCGCTGCA
TCCGCTCCGGTCACGTCACCAAGGCCCTCTAG

Upstream 100 bases:

>100_bases
AGCACCCGAAAAAAAGCATCGTTCGCCACTTTTTGCTTGCATCGAAAGTGCGACTCTGCTATTAATTACGACTTCAGTAA
CCACCGGAGGGTAGAAAGAA

Downstream 100 bases:

>100_bases
TAGATCTTCCGCAAAGCAATTAAAGCCGCGGCGCAGCATGCGTCCGCGGCTTTATTTTTGCCCGCAGGATACATCTAGCC
GCAGAGGGCGGTCACCTCGA

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSRICEICGKGPSFGNNVSHANNKTSKIWRPNLQKIKAVKNGTVRSIKVCTRCIRSGHVTKAL

Sequences:

>Translated_63_residues
MSRICEICGKGPSFGNNVSHANNKTSKIWRPNLQKIKAVKNGTVRSIKVCTRCIRSGHVTKAL
>Mature_62_residues
SRICEICGKGPSFGNNVSHANNKTSKIWRPNLQKIKAVKNGTVRSIKVCTRCIRSGHVTKAL

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_GEOBB (B5E9N4)

Other databases:

- EMBL:   CP001124
- RefSeq:   YP_002140004.1
- ProteinModelPortal:   B5E9N4
- GeneID:   6780067
- GenomeReviews:   CP001124_GR
- KEGG:   gbm:Gbem_3209
- HOGENOM:   HBG597003
- OMA:   NACTSCI
- ProtClustDB:   PRK00359
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 6938; Mature: 6807

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRICEICGKGPSFGNNVSHANNKTSKIWRPNLQKIKAVKNGTVRSIKVCTRCIRSGHVT
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
KAL
CCC
>Mature Secondary Structure 
SRICEICGKGPSFGNNVSHANNKTSKIWRPNLQKIKAVKNGTVRSIKVCTRCIRSGHVT
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
KAL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA