| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is mshA [H]
Identifier: 197118172
GI number: 197118172
Start: 2062567
End: 2063718
Strand: Direct
Name: mshA [H]
Synonym: Gbem_1787
Alternate gene names: 197118172
Gene position: 2062567-2063718 (Clockwise)
Preceding gene: 197118171
Following gene: 197118173
Centisome position: 44.69
GC content: 64.24
Gene sequence:
>1152_bases ATGGATCTGATCATCCCCAAGGTAATGCACGTCATCCTCTCGCTCGATGCAGGCGGAGGCGCCGAGAGGCTGGTCTATGA CCTCGTGCGTGACGCCGTTTTTTCCCCCGCCCCCCCGGTCGTCTGCTGTCTCTACCATCCCGGCAAACTGGGAGTCCTGC TGCAACAGGAGGGTTTTCGGGTGTACTCGCCAGCCACCAAACCGGGTGGGCTCCAGTGGTCCCTCGTCCCCTGGCTCGCC CGGATCATCCGAAAGGAAGGTGTCGATGTGGTGCACGCCCACCAGTACACCCCCATGTTCTACAGCGTCCCGGCGGCGCT CGCGGCGGGCCGCAAGCGGGTCATCTACACCGAACACGGCAGGCTCTACCCGGACCTTCCCAAGTGGAAACGGCGCCTTT GCAACCCGCTTTTATCGTGGGGGATCGACCAGATCGTCTCCATCTCGGACGGCACCAAGGAGGCGATGGTGGCGGTCGAC AACTTCGCCGGGGATCGCATCGCCGTGGTGCACAACGGCGTCCTCTTCGCCAAGCCCGGCTCCGATTTCGACCCCGCAGA AAAGAGGCGCTCGCTCGGCATCCCCCCCTCGCACCGGATCATCGGGACCGCGGCGCGGCTGGAGCGGATCAAGAACCTCC CCATGATGCTGCGCGGTTTCCAGCGCGTGCTGGAAAAGATGCCCGATACCTCGCTCCTGATCGCGGGGAGGGGGTCGCGC GAAAGGGCCCTGAAGCAGTACGCCCAGGAACTCGGCATAGCGGATAAGGTGCGTTTCCTCGGGCTGCGGGACGATCTCCC CGAGATCTACCCGCTTTTCGAGCTCTTCCTGCTCACCTCCTTTTCGGAAGGGATCTCCGTCACCCTGCTGGAGGCGATGT CTCACGGCGTGGCGCCCATCGCCACCCGGGTGGGGGGCAACCCGGAGGTGGTCCTCGAGGGCGAGACCGGCCTCCTGGTG GGGGATGACGATTACATCGAGCTCGGCGAGAAGATCCTGGAGCTCATGGCGGTTCCTGAGCGCGCCAGGCGCATGGGGGA GGCCGCCCACGGCTGGGTCGGGAATCATTTTTCCTTCGAAAAGATGGTCCAGGACTATCTGCGGCTCTACCGGGGAGCCG AGGCTAACCCCGATGATCAGGTAAGGGAATAG
Upstream 100 bases:
>100_bases GGCCTACTATACCTCCCTTACCGAGACGCTCGGCTACTACGCCAAGCGGGCCCTGGAGCGTACGGGGCTGTACCATGCCC TCTAGGAGAAGGCCGCAGCT
Downstream 100 bases:
>100_bases GTGGAACATGCGTGAGATAGTCCTTTACATCCTGATCGCAATGTCGGCTCCGGCTGTCCTGCGTCGTCCCTTCTTGGGCG TGGTGATCTACCTCGGCGCC
Product: group glycosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MDLIIPKVMHVILSLDAGGGAERLVYDLVRDAVFSPAPPVVCCLYHPGKLGVLLQQEGFRVYSPATKPGGLQWSLVPWLA RIIRKEGVDVVHAHQYTPMFYSVPAALAAGRKRVIYTEHGRLYPDLPKWKRRLCNPLLSWGIDQIVSISDGTKEAMVAVD NFAGDRIAVVHNGVLFAKPGSDFDPAEKRRSLGIPPSHRIIGTAARLERIKNLPMMLRGFQRVLEKMPDTSLLIAGRGSR ERALKQYAQELGIADKVRFLGLRDDLPEIYPLFELFLLTSFSEGISVTLLEAMSHGVAPIATRVGGNPEVVLEGETGLLV GDDDYIELGEKILELMAVPERARRMGEAAHGWVGNHFSFEKMVQDYLRLYRGAEANPDDQVRE
Sequences:
>Translated_383_residues MDLIIPKVMHVILSLDAGGGAERLVYDLVRDAVFSPAPPVVCCLYHPGKLGVLLQQEGFRVYSPATKPGGLQWSLVPWLA RIIRKEGVDVVHAHQYTPMFYSVPAALAAGRKRVIYTEHGRLYPDLPKWKRRLCNPLLSWGIDQIVSISDGTKEAMVAVD NFAGDRIAVVHNGVLFAKPGSDFDPAEKRRSLGIPPSHRIIGTAARLERIKNLPMMLRGFQRVLEKMPDTSLLIAGRGSR ERALKQYAQELGIADKVRFLGLRDDLPEIYPLFELFLLTSFSEGISVTLLEAMSHGVAPIATRVGGNPEVVLEGETGLLV GDDDYIELGEKILELMAVPERARRMGEAAHGWVGNHFSFEKMVQDYLRLYRGAEANPDDQVRE >Mature_383_residues MDLIIPKVMHVILSLDAGGGAERLVYDLVRDAVFSPAPPVVCCLYHPGKLGVLLQQEGFRVYSPATKPGGLQWSLVPWLA RIIRKEGVDVVHAHQYTPMFYSVPAALAAGRKRVIYTEHGRLYPDLPKWKRRLCNPLLSWGIDQIVSISDGTKEAMVAVD NFAGDRIAVVHNGVLFAKPGSDFDPAEKRRSLGIPPSHRIIGTAARLERIKNLPMMLRGFQRVLEKMPDTSLLIAGRGSR ERALKQYAQELGIADKVRFLGLRDDLPEIYPLFELFLLTSFSEGISVTLLEAMSHGVAPIATRVGGNPEVVLEGETGLLV GDDDYIELGEKILELMAVPERARRMGEAAHGWVGNHFSFEKMVQDYLRLYRGAEANPDDQVRE
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=309, Percent_Identity=23.9482200647249, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17532709, Length=309, Percent_Identity=21.6828478964401, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI9755344, Length=312, Percent_Identity=23.7179487179487, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 42539; Mature: 42539
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIIPKVMHVILSLDAGGGAERLVYDLVRDAVFSPAPPVVCCLYHPGKLGVLLQQEGFR CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCE VYSPATKPGGLQWSLVPWLARIIRKEGVDVVHAHQYTPMFYSVPAALAAGRKRVIYTEHG EECCCCCCCCCEEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCC RLYPDLPKWKRRLCNPLLSWGIDQIVSISDGTKEAMVAVDNFAGDRIAVVHNGVLFAKPG CCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCHHHHEEEECCCCCEEEEEECCEEEECCC SDFDPAEKRRSLGIPPSHRIIGTAARLERIKNLPMMLRGFQRVLEKMPDTSLLIAGRGSR CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCH ERALKQYAQELGIADKVRFLGLRDDLPEIYPLFELFLLTSFSEGISVTLLEAMSHGVAPI HHHHHHHHHHCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHH ATRVGGNPEVVLEGETGLLVGDDDYIELGEKILELMAVPERARRMGEAAHGWVGNHFSFE HHHCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHH KMVQDYLRLYRGAEANPDDQVRE HHHHHHHHHHCCCCCCCCHHCCC >Mature Secondary Structure MDLIIPKVMHVILSLDAGGGAERLVYDLVRDAVFSPAPPVVCCLYHPGKLGVLLQQEGFR CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCE VYSPATKPGGLQWSLVPWLARIIRKEGVDVVHAHQYTPMFYSVPAALAAGRKRVIYTEHG EECCCCCCCCCEEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCC RLYPDLPKWKRRLCNPLLSWGIDQIVSISDGTKEAMVAVDNFAGDRIAVVHNGVLFAKPG CCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCHHHHEEEECCCCCEEEEEECCEEEECCC SDFDPAEKRRSLGIPPSHRIIGTAARLERIKNLPMMLRGFQRVLEKMPDTSLLIAGRGSR CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCH ERALKQYAQELGIADKVRFLGLRDDLPEIYPLFELFLLTSFSEGISVTLLEAMSHGVAPI HHHHHHHHHHCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHH ATRVGGNPEVVLEGETGLLVGDDDYIELGEKILELMAVPERARRMGEAAHGWVGNHFSFE HHHCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHH KMVQDYLRLYRGAEANPDDQVRE HHHHHHHHHHCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA