Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118170

Identifier: 197118170

GI number: 197118170

Start: 2060351

End: 2061421

Strand: Direct

Name: 197118170

Synonym: Gbem_1785

Alternate gene names: NA

Gene position: 2060351-2061421 (Clockwise)

Preceding gene: 197118169

Following gene: 197118171

Centisome position: 44.64

GC content: 64.24

Gene sequence:

>1071_bases
ATGTTCCGGATCTCCGTAAGGCGTCGCACTTTCCTGAAGGTTTTGGCGGCCATGCTCGTCCTCGTGGCGTGGGGAAGGAA
GGGCGTCTCCCACGCCGCCCAGGCCGGTAAAAGGAGCAGGGTGGTGGTGGTGCACGATGCCGGGGCCGCCCCGGGGCCGG
GGCTCGACAATGCGGACCTGGACCCGGAGACGGTAAAGCGGATGGTGAACCAGGGGGTCGTTGCCCTTACCGGCGCCGCC
GATCTCAAAAGCGCCTGGAGAAAGGTCATCCCCGACCCCTCCAAGCGGGTCGCCGTCAAGGTCAACTGCCAGATACGCGG
GATCTACACCAAGGCGAAGGTGGTGCAACCGGTGTTGGAGGGGCTGATGCTCGCCGGCGTCTCCGCAGACAACATCCTGG
TCTACGACATGACCGACAACGCCTTCGAACTGGCGGGCTTCAAGCGCAACCTGGGAGCCGGGGTCAAGGTGGGGAAGGTG
GCGGATTTCGGCGGCTATTCCAGGATCCTGTACCACCGGCTGGCGAACCTCCTCACCGGGGGGCACCCGTATTCCGTCGC
GAACCTCGTCACCAACACCCTGCACGCGCCCGCGGGGCGCTGGGACTGCGACTACCTGATCAACGTTCCCGTGCTGAAGG
CGCTGGACGGCTACTGCGGGGTGACCCTCAGCATGAAGAACCATTACGGCTCCATCGGCAACCCCGGTGACCACCACAAG
GACATCATGGATCACATACCGCTCATCAACTCGCAGCCGGAGATCAAGGACAAGACGAGGCTCATCGTGATGGACGCTAT
CTTCGGAGAGTACCAGTGGGTGAACGGCCGCGACCAAAGCCATGTGGTACGGGTGAACAAGGTCCTGGTGGCTTGCGACA
CCGTGGCGATCGACGCCACCGGCTGGCGCATGATCGACGCGCTGAGAAAGGAGCACGACCTCCCTCCGGTGGCGCCGAGG
CCCCAGTACATAGCGAAGGCGGCGGCCCTTGGGCTTGGGGTTGCCGATCCGTCGCAGATCGAACTGCTTCAGCTTGAGAC
CGGCAAGGGATCCGGGGGGAGGGGACGGTGA

Upstream 100 bases:

>100_bases
GAGGAGGGGGTGATGCAGGAGTACCTCTCCGACCGCGAAAGGCGGGACGCAGCGGTGCTCCCCTTGATGCGGGGGGTGTT
CCCTCCGCAGGGGAGGTAGC

Downstream 100 bases:

>100_bases
AGCTTCTCGTCGGAGCCTATCGCGAGCTCTCCGCGGAGCTGTTGCGGGAGCGCCACCACAGGCGGGTTCAGGCGCTGGAT
TGCATCGCCTTTCTTACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MFRISVRRRTFLKVLAAMLVLVAWGRKGVSHAAQAGKRSRVVVVHDAGAAPGPGLDNADLDPETVKRMVNQGVVALTGAA
DLKSAWRKVIPDPSKRVAVKVNCQIRGIYTKAKVVQPVLEGLMLAGVSADNILVYDMTDNAFELAGFKRNLGAGVKVGKV
ADFGGYSRILYHRLANLLTGGHPYSVANLVTNTLHAPAGRWDCDYLINVPVLKALDGYCGVTLSMKNHYGSIGNPGDHHK
DIMDHIPLINSQPEIKDKTRLIVMDAIFGEYQWVNGRDQSHVVRVNKVLVACDTVAIDATGWRMIDALRKEHDLPPVAPR
PQYIAKAAALGLGVADPSQIELLQLETGKGSGGRGR

Sequences:

>Translated_356_residues
MFRISVRRRTFLKVLAAMLVLVAWGRKGVSHAAQAGKRSRVVVVHDAGAAPGPGLDNADLDPETVKRMVNQGVVALTGAA
DLKSAWRKVIPDPSKRVAVKVNCQIRGIYTKAKVVQPVLEGLMLAGVSADNILVYDMTDNAFELAGFKRNLGAGVKVGKV
ADFGGYSRILYHRLANLLTGGHPYSVANLVTNTLHAPAGRWDCDYLINVPVLKALDGYCGVTLSMKNHYGSIGNPGDHHK
DIMDHIPLINSQPEIKDKTRLIVMDAIFGEYQWVNGRDQSHVVRVNKVLVACDTVAIDATGWRMIDALRKEHDLPPVAPR
PQYIAKAAALGLGVADPSQIELLQLETGKGSGGRGR
>Mature_356_residues
MFRISVRRRTFLKVLAAMLVLVAWGRKGVSHAAQAGKRSRVVVVHDAGAAPGPGLDNADLDPETVKRMVNQGVVALTGAA
DLKSAWRKVIPDPSKRVAVKVNCQIRGIYTKAKVVQPVLEGLMLAGVSADNILVYDMTDNAFELAGFKRNLGAGVKVGKV
ADFGGYSRILYHRLANLLTGGHPYSVANLVTNTLHAPAGRWDCDYLINVPVLKALDGYCGVTLSMKNHYGSIGNPGDHHK
DIMDHIPLINSQPEIKDKTRLIVMDAIFGEYQWVNGRDQSHVVRVNKVLVACDTVAIDATGWRMIDALRKEHDLPPVAPR
PQYIAKAAALGLGVADPSQIELLQLETGKGSGGRGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38498; Mature: 38498

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRISVRRRTFLKVLAAMLVLVAWGRKGVSHAAQAGKRSRVVVVHDAGAAPGPGLDNADL
CEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
DPETVKRMVNQGVVALTGAADLKSAWRKVIPDPSKRVAVKVNCQIRGIYTKAKVVQPVLE
CHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHH
GLMLAGVSADNILVYDMTDNAFELAGFKRNLGAGVKVGKVADFGGYSRILYHRLANLLTG
HHHHCCCCCCCEEEEECCCCCEEHHCCHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCC
GHPYSVANLVTNTLHAPAGRWDCDYLINVPVLKALDGYCGVTLSMKNHYGSIGNPGDHHK
CCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHH
DIMDHIPLINSQPEIKDKTRLIVMDAIFGEYQWVNGRDQSHVVRVNKVLVACDTVAIDAT
HHHHHCCCCCCCCCCCCCCEEEEEEEHHCCEEECCCCCCCCEEEEEEEEEEEEEEEEECC
GWRMIDALRKEHDLPPVAPRPQYIAKAAALGLGVADPSQIELLQLETGKGSGGRGR
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MFRISVRRRTFLKVLAAMLVLVAWGRKGVSHAAQAGKRSRVVVVHDAGAAPGPGLDNADL
CEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
DPETVKRMVNQGVVALTGAADLKSAWRKVIPDPSKRVAVKVNCQIRGIYTKAKVVQPVLE
CHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHH
GLMLAGVSADNILVYDMTDNAFELAGFKRNLGAGVKVGKVADFGGYSRILYHRLANLLTG
HHHHCCCCCCCEEEEECCCCCEEHHCCHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCC
GHPYSVANLVTNTLHAPAGRWDCDYLINVPVLKALDGYCGVTLSMKNHYGSIGNPGDHHK
CCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHH
DIMDHIPLINSQPEIKDKTRLIVMDAIFGEYQWVNGRDQSHVVRVNKVLVACDTVAIDAT
HHHHHCCCCCCCCCCCCCCEEEEEEEHHCCEEECCCCCCCCEEEEEEEEEEEEEEEEECC
GWRMIDALRKEHDLPPVAPRPQYIAKAAALGLGVADPSQIELLQLETGKGSGGRGR
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA