| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118160
Identifier: 197118160
GI number: 197118160
Start: 2046719
End: 2047753
Strand: Direct
Name: 197118160
Synonym: Gbem_1775
Alternate gene names: NA
Gene position: 2046719-2047753 (Clockwise)
Preceding gene: 197118159
Following gene: 197118161
Centisome position: 44.35
GC content: 61.74
Gene sequence:
>1035_bases ATGCCAGGGTACCGTGTCATACAAGAACTCGAACCTTCCCGCTGGGACGCCTACGTCGACTCCATGCCGGCTGCGACCTC CTACCATTTGAGCGCCTGGGGGAAGATCATAGGTGAGAGCTTCGGGCACCGGACCTATTACCTGGCGGCAGTGGACCAGG CTGGCGAGGTAGCGGGGGTGCTCCCCCTGGTGCACATGAAGAGCGCTCTCTTTGGCAGCTTCCTGGTCTCCGTCCCCTTC GTGAACTACGGGGGGCTTTTGTGTCGGGACCGCGGCTGCGAACAGGCGCTCTTGCGCGAGGCGGAAGAGTTGCGCCAAAG CTGCGGCGCCGAGCATGTGGAGCTGCGCCACCTAGGCGCCGGCATCGAGGGACTACCTTCGCGGGAGCACAAGGTCACCA TGATGCTCCAGTTAAGCAAGGACCCCGTCGAGCAGTGGGCGCTTTTCAACGCGAAACTCAGGAACCAGATCCGCAAGGCT CAAAAAAGCGGCATCTCCTTCCGGACCGGCGGAGTCGAACTCTTGGATGACTTCTACGACGTCTTTGCCCGCAACATGCG CGACCTGGGGACGCCGGTCTACGGCAAGGAATTTTTCGCCAACGTCCTTGGCGCCCTCCCCAGGACCACACGCATCGCGG CGGTGCAGTTGGAGGGGAAGGCGGTCGCCGCCGGGATCCTGTCGCGCTACAAAAAAAGCATGGAGATGCCCTGGGCCTCC TCCATCGCCGAATACAAGACGCTTTGTCCCAACAACCTCCTCTACTGGGAGTCGATCCGTTTCGCCATAGCCGAGGGGTG CGCCTCCTTCGACTTCGGGCGCTCCACCCCCAACGAGGGGACCTACAACTTTAAGAAGCAGTGGGGGGCGGAGCCGGTAC AGCTTTACTGGCAGTATCTGCTGGAAAAGGGGAAGGCACTGCCGGAGCTCAATCCCAAGAACCCGAAGTTCCAGGCCGCT ATCAGCATTTGGAAACGGCTGCCGGTGGGTCTGACCAGGCTGATCGGCCCAGCGATCGTGCGCAACATCCCGTGA
Upstream 100 bases:
>100_bases ACAACAACCTCGCAAAGACCGAGGACAAGCTTCGCTACCTGCTCAAGGGGGTCCGCTACGGCACCATGAGCCAGGCGCTG GGGCTCTAAAGGAAGGGAGC
Downstream 100 bases:
>100_bases GGACCCATGCACTTTTCCGTGATCATACCGGCAAAAAATGAAAGGGAGAACATCGGGCGCTGCCTCGACTCCATCTTCCA GGTCGACTGGGACCCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPGYRVIQELEPSRWDAYVDSMPAATSYHLSAWGKIIGESFGHRTYYLAAVDQAGEVAGVLPLVHMKSALFGSFLVSVPF VNYGGLLCRDRGCEQALLREAEELRQSCGAEHVELRHLGAGIEGLPSREHKVTMMLQLSKDPVEQWALFNAKLRNQIRKA QKSGISFRTGGVELLDDFYDVFARNMRDLGTPVYGKEFFANVLGALPRTTRIAAVQLEGKAVAAGILSRYKKSMEMPWAS SIAEYKTLCPNNLLYWESIRFAIAEGCASFDFGRSTPNEGTYNFKKQWGAEPVQLYWQYLLEKGKALPELNPKNPKFQAA ISIWKRLPVGLTRLIGPAIVRNIP
Sequences:
>Translated_344_residues MPGYRVIQELEPSRWDAYVDSMPAATSYHLSAWGKIIGESFGHRTYYLAAVDQAGEVAGVLPLVHMKSALFGSFLVSVPF VNYGGLLCRDRGCEQALLREAEELRQSCGAEHVELRHLGAGIEGLPSREHKVTMMLQLSKDPVEQWALFNAKLRNQIRKA QKSGISFRTGGVELLDDFYDVFARNMRDLGTPVYGKEFFANVLGALPRTTRIAAVQLEGKAVAAGILSRYKKSMEMPWAS SIAEYKTLCPNNLLYWESIRFAIAEGCASFDFGRSTPNEGTYNFKKQWGAEPVQLYWQYLLEKGKALPELNPKNPKFQAA ISIWKRLPVGLTRLIGPAIVRNIP >Mature_343_residues PGYRVIQELEPSRWDAYVDSMPAATSYHLSAWGKIIGESFGHRTYYLAAVDQAGEVAGVLPLVHMKSALFGSFLVSVPFV NYGGLLCRDRGCEQALLREAEELRQSCGAEHVELRHLGAGIEGLPSREHKVTMMLQLSKDPVEQWALFNAKLRNQIRKAQ KSGISFRTGGVELLDDFYDVFARNMRDLGTPVYGKEFFANVLGALPRTTRIAAVQLEGKAVAAGILSRYKKSMEMPWASS IAEYKTLCPNNLLYWESIRFAIAEGCASFDFGRSTPNEGTYNFKKQWGAEPVQLYWQYLLEKGKALPELNPKNPKFQAAI SIWKRLPVGLTRLIGPAIVRNIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38481; Mature: 38350
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGYRVIQELEPSRWDAYVDSMPAATSYHLSAWGKIIGESFGHRTYYLAAVDQAGEVAGV CCCHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH LPLVHMKSALFGSFLVSVPFVNYGGLLCRDRGCEQALLREAEELRQSCGAEHVELRHLGA HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC GIEGLPSREHKVTMMLQLSKDPVEQWALFNAKLRNQIRKAQKSGISFRTGGVELLDDFYD CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH VFARNMRDLGTPVYGKEFFANVLGALPRTTRIAAVQLEGKAVAAGILSRYKKSMEMPWAS HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHH SIAEYKTLCPNNLLYWESIRFAIAEGCASFDFGRSTPNEGTYNFKKQWGAEPVQLYWQYL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH LEKGKALPELNPKNPKFQAAISIWKRLPVGLTRLIGPAIVRNIP HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PGYRVIQELEPSRWDAYVDSMPAATSYHLSAWGKIIGESFGHRTYYLAAVDQAGEVAGV CCHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH LPLVHMKSALFGSFLVSVPFVNYGGLLCRDRGCEQALLREAEELRQSCGAEHVELRHLGA HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC GIEGLPSREHKVTMMLQLSKDPVEQWALFNAKLRNQIRKAQKSGISFRTGGVELLDDFYD CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH VFARNMRDLGTPVYGKEFFANVLGALPRTTRIAAVQLEGKAVAAGILSRYKKSMEMPWAS HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHH SIAEYKTLCPNNLLYWESIRFAIAEGCASFDFGRSTPNEGTYNFKKQWGAEPVQLYWQYL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH LEKGKALPELNPKNPKFQAAISIWKRLPVGLTRLIGPAIVRNIP HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA