Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118128

Identifier: 197118128

GI number: 197118128

Start: 2007261

End: 2007608

Strand: Direct

Name: 197118128

Synonym: Gbem_1743

Alternate gene names: NA

Gene position: 2007261-2007608 (Clockwise)

Preceding gene: 197118127

Following gene: 197118129

Centisome position: 43.49

GC content: 52.87

Gene sequence:

>348_bases
ATGAACATCCAGAGCATCGAACTCAACGACGAAACCACACCCTCGGTAGACGCGAGGGAACTCCACGGAAGGCTGGACTC
CAAAGAGATGTTCGCCCACTGGATCAAGGACCAGATCAGAAGGGCCATGCTGGTTGACGGCGTGGATTACGTTATTGGGG
AATCTCCCAAAAACCCCAAAGGTGGCAGACCCACAGTGGAATACCTTCTCTCCCTGGATGCCGCCAAGAACATCTGCATG
ATGTCCCAAAGCACACAGGGCCAAGCCCTCAGGAAGTACTTCATCGAGGTGGAGAAACGCTACCGCGCACAACTGCAGCT
CACCGAAATCATACGTATTTTGAGATAA

Upstream 100 bases:

>100_bases
CATGAAGACAGCTGATGACAAGCTCGTACCGTGGCTGGCATCTCAGACCGATGTGCTGGCTGAAGATTGGCGCATCGTAC
TTCCTAACTAAGGAGACCCA

Downstream 100 bases:

>100_bases
CCCCCCGCATAGATACAACAGCCGCGCATTGTCTCCCCCAGAGGATTCCCTCCCCTCACCATTTCATCAACGATTTCAGC
TAGTACGAAATAACCCTGCC

Product: AntA/AntB antirepressor domain-containing protein

Products: NA

Alternate protein names: Xin-Antitoxin System Toxin Component Bro Family; Phage Anti-Repressor; Antirepressor; Anta/Antb Antirepressor Domain Protein; Phage-Encoded Protein; AntA/AntB Antirepressor Domain Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MNIQSIELNDETTPSVDARELHGRLDSKEMFAHWIKDQIRRAMLVDGVDYVIGESPKNPKGGRPTVEYLLSLDAAKNICM
MSQSTQGQALRKYFIEVEKRYRAQLQLTEIIRILR

Sequences:

>Translated_115_residues
MNIQSIELNDETTPSVDARELHGRLDSKEMFAHWIKDQIRRAMLVDGVDYVIGESPKNPKGGRPTVEYLLSLDAAKNICM
MSQSTQGQALRKYFIEVEKRYRAQLQLTEIIRILR
>Mature_115_residues
MNIQSIELNDETTPSVDARELHGRLDSKEMFAHWIKDQIRRAMLVDGVDYVIGESPKNPKGGRPTVEYLLSLDAAKNICM
MSQSTQGQALRKYFIEVEKRYRAQLQLTEIIRILR

Specific function: Unknown

COG id: COG3561

COG function: function code K; Phage anti-repressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13280; Mature: 13280

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQSIELNDETTPSVDARELHGRLDSKEMFAHWIKDQIRRAMLVDGVDYVIGESPKNPK
CCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC
GGRPTVEYLLSLDAAKNICMMSQSTQGQALRKYFIEVEKRYRAQLQLTEIIRILR
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNIQSIELNDETTPSVDARELHGRLDSKEMFAHWIKDQIRRAMLVDGVDYVIGESPKNPK
CCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC
GGRPTVEYLLSLDAAKNICMMSQSTQGQALRKYFIEVEKRYRAQLQLTEIIRILR
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA