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The map label for this gene is yggU [C]

Identifier: 197118100

GI number: 197118100

Start: 1981283

End: 1981588

Strand: Direct

Name: yggU [C]

Synonym: Gbem_1715

Alternate gene names: 197118100

Gene position: 1981283-1981588 (Clockwise)

Preceding gene: 197118099

Following gene: 197118106

Centisome position: 42.93

GC content: 61.76

Gene sequence:

>306_bases
ATGTCGAAGAAACCGTTTTTTTACTGGGAGGGAGACACGCTCGTGCTCAACGTGCTGGGCACCCCCAATGCCAAGCGCGA
CGCCATCGGCAAGCCGAAGGGGCACCAACTCTGCATCAGTGTGACCGCAGTTCCCCGTGCCGGGCGGGCCACCGACCACA
TGGTGCGCTTTCTGGCGGAGGAATTCGAGGTGGCCGTCTCCGACATCCAGGTGGTCTTCGGCCGCATGAACGTCAACAAG
CAGCTGCGGATCAAGGCGCCGAAGCGGTTGCCTTCGGTCATCGGGCAGCAGGATCTTGCCCTTTGA

Upstream 100 bases:

>100_bases
GGGCGAGCAGTCCGTTAAGCCGGGTAGGATGAGCCGTTGGGGTAACCGCCATTAGTCCGGCGCAAGCTGGAAACGTAGAT
CAGGGAGGCAGGCAGAAGTA

Downstream 100 bases:

>100_bases
ACTCAATAAAAAAAGGCGACGTCTGCTGTGACGTCGCCTTCTGCACTTTCAGTAAGTCTTATGATCTACTGCGGTACACG
GATGCTGTCGATTGTCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSKKPFFYWEGDTLVLNVLGTPNAKRDAIGKPKGHQLCISVTAVPRAGRATDHMVRFLAEEFEVAVSDIQVVFGRMNVNK
QLRIKAPKRLPSVIGQQDLAL

Sequences:

>Translated_101_residues
MSKKPFFYWEGDTLVLNVLGTPNAKRDAIGKPKGHQLCISVTAVPRAGRATDHMVRFLAEEFEVAVSDIQVVFGRMNVNK
QLRIKAPKRLPSVIGQQDLAL
>Mature_100_residues
SKKPFFYWEGDTLVLNVLGTPNAKRDAIGKPKGHQLCISVTAVPRAGRATDHMVRFLAEEFEVAVSDIQVVFGRMNVNKQ
LRIKAPKRLPSVIGQQDLAL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=84, Percent_Identity=35.7142857142857, Blast_Score=59, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 11231; Mature: 11100

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKPFFYWEGDTLVLNVLGTPNAKRDAIGKPKGHQLCISVTAVPRAGRATDHMVRFLAE
CCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
EFEVAVSDIQVVFGRMNVNKQLRIKAPKRLPSVIGQQDLAL
HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKKPFFYWEGDTLVLNVLGTPNAKRDAIGKPKGHQLCISVTAVPRAGRATDHMVRFLAE
CCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
EFEVAVSDIQVVFGRMNVNKQLRIKAPKRLPSVIGQQDLAL
HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA