Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197118098
Identifier: 197118098
GI number: 197118098
Start: 1979643
End: 1980716
Strand: Direct
Name: 197118098
Synonym: Gbem_1713
Alternate gene names: NA
Gene position: 1979643-1980716 (Clockwise)
Preceding gene: 197118097
Following gene: 197118099
Centisome position: 42.89
GC content: 59.5
Gene sequence:
>1074_bases ATGAAGATCGCGGCACGCTTTGAGCTGTGGGAAAGGCTGCGGCAGGCCCGGCTGGTAACAGGGGATCTTCTCTCCGCACC ATCCTCCACCTGGTATATCAGGGCCATGCTGGGGTTCGCCGGGTGGATCGGCGCCTGGTTCATCTTGGGGTTCGTCGGCA CCAGCTTCGCCATGGTGATGCGGAGCGCCGGGGCTGCGAGCTTTGCGGCGATACTTTGCTGCGGCGGTGCCTATGCGATC TTCCGGTTGCCATCGAAAGGAGACTTTGCGGGACAATTCGGTCTGGCGGTGGGACTTGCGGGACAGGCGCTATTCGCCGT TGCCATCTTCAAGGAACTAAGCCCCAGCATATCGCTTGGCTGCTTCATATTTTTTTGCGTCGAGGCGCTCCTTACGGTGC TGATGCCCAACTTCATGCACCGCATTTTCACCACCGTCGCGGCAGTGGCAGCACTCTTCTATGCATCTGTGCAGGCCGGA CTGCATGGAGTTGTGCTTTCGATTGTCGCGGCTGCATGCGCGGTCGTCTGGCGCGGGGAGATGCGGCTGGCTGCGCGTGC GGAACTGTGGCAGCCGGTGGGCTATGGTCTCGCCCTCGGGGTGCTCCAGCTCGCGGCCTATTCAGCCGCGGGAGAAGCGA TGTTGTCGGGCCTGCATCACGGCGAAGCCGATTGGTTGCAAAGGCATGGGAACGACGTGGGCACGGCACTGGTTGCCGTC ATCTTCCTTGCGGTGACCGTGCAGATCCTTAAGGAACTGGACATCGAGGTCTCTGGTAAGGAAGGCATCGCCATCGTCTC TTGCATGGCGCTGATCATGGCGGCCTCTTTCCCGACCCACGGACTAGCTGCCGCGGCTCTTATACTGATTCTCGGATTTG CCGGCGGTAACAGGGTGTTGTTCGGTCTGGGTTTAATGGCAGTGGCATCGTTTCTGTCCCATTACTACTATCAGATGCGC GAGACACTGCTTATCAAATCGATGATTCTTGCAGCGACAGGGACGCTTCTCTTAGTGGCAAGGTGGGGGCTGCTGAGATT GATTCCGGCAAAGGGAGGGCGGCAAGATGCGTAA
Upstream 100 bases:
>100_bases ACCAGGATGCAGGGGCGTTGCTCTTCGTAGGGGTCACCGTGTTGGGGCTTTCCGCGGTCGGCGGGTGGTGGCTACGGGCG GTAGCAGGCGAGGTGGAATC
Downstream 100 bases:
>100_bases TATCGTCCTCTTTGTTACTGCCGCATGTGTGCTCGTGCTGGTCAATTACAACATTTGGCAAAGGGAAGAGCTTATCCATA GCGGCCGGACGGTGCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKIAARFELWERLRQARLVTGDLLSAPSSTWYIRAMLGFAGWIGAWFILGFVGTSFAMVMRSAGAASFAAILCCGGAYAI FRLPSKGDFAGQFGLAVGLAGQALFAVAIFKELSPSISLGCFIFFCVEALLTVLMPNFMHRIFTTVAAVAALFYASVQAG LHGVVLSIVAAACAVVWRGEMRLAARAELWQPVGYGLALGVLQLAAYSAAGEAMLSGLHHGEADWLQRHGNDVGTALVAV IFLAVTVQILKELDIEVSGKEGIAIVSCMALIMAASFPTHGLAAAALILILGFAGGNRVLFGLGLMAVASFLSHYYYQMR ETLLIKSMILAATGTLLLVARWGLLRLIPAKGGRQDA
Sequences:
>Translated_357_residues MKIAARFELWERLRQARLVTGDLLSAPSSTWYIRAMLGFAGWIGAWFILGFVGTSFAMVMRSAGAASFAAILCCGGAYAI FRLPSKGDFAGQFGLAVGLAGQALFAVAIFKELSPSISLGCFIFFCVEALLTVLMPNFMHRIFTTVAAVAALFYASVQAG LHGVVLSIVAAACAVVWRGEMRLAARAELWQPVGYGLALGVLQLAAYSAAGEAMLSGLHHGEADWLQRHGNDVGTALVAV IFLAVTVQILKELDIEVSGKEGIAIVSCMALIMAASFPTHGLAAAALILILGFAGGNRVLFGLGLMAVASFLSHYYYQMR ETLLIKSMILAATGTLLLVARWGLLRLIPAKGGRQDA >Mature_357_residues MKIAARFELWERLRQARLVTGDLLSAPSSTWYIRAMLGFAGWIGAWFILGFVGTSFAMVMRSAGAASFAAILCCGGAYAI FRLPSKGDFAGQFGLAVGLAGQALFAVAIFKELSPSISLGCFIFFCVEALLTVLMPNFMHRIFTTVAAVAALFYASVQAG LHGVVLSIVAAACAVVWRGEMRLAARAELWQPVGYGLALGVLQLAAYSAAGEAMLSGLHHGEADWLQRHGNDVGTALVAV IFLAVTVQILKELDIEVSGKEGIAIVSCMALIMAASFPTHGLAAAALILILGFAGGNRVLFGLGLMAVASFLSHYYYQMR ETLLIKSMILAATGTLLLVARWGLLRLIPAKGGRQDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37827; Mature: 37827
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAARFELWERLRQARLVTGDLLSAPSSTWYIRAMLGFAGWIGAWFILGFVGTSFAMVM CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSAGAASFAAILCCGGAYAIFRLPSKGDFAGQFGLAVGLAGQALFAVAIFKELSPSISLG HHCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH CFIFFCVEALLTVLMPNFMHRIFTTVAAVAALFYASVQAGLHGVVLSIVAAACAVVWRGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MRLAARAELWQPVGYGLALGVLQLAAYSAAGEAMLSGLHHGEADWLQRHGNDVGTALVAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHH IFLAVTVQILKELDIEVSGKEGIAIVSCMALIMAASFPTHGLAAAALILILGFAGGNRVL HHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH FGLGLMAVASFLSHYYYQMRETLLIKSMILAATGTLLLVARWGLLRLIPAKGGRQDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MKIAARFELWERLRQARLVTGDLLSAPSSTWYIRAMLGFAGWIGAWFILGFVGTSFAMVM CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSAGAASFAAILCCGGAYAIFRLPSKGDFAGQFGLAVGLAGQALFAVAIFKELSPSISLG HHCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH CFIFFCVEALLTVLMPNFMHRIFTTVAAVAALFYASVQAGLHGVVLSIVAAACAVVWRGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MRLAARAELWQPVGYGLALGVLQLAAYSAAGEAMLSGLHHGEADWLQRHGNDVGTALVAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHH IFLAVTVQILKELDIEVSGKEGIAIVSCMALIMAASFPTHGLAAAALILILGFAGGNRVL HHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH FGLGLMAVASFLSHYYYQMRETLLIKSMILAATGTLLLVARWGLLRLIPAKGGRQDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA