| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is mtnN [H]
Identifier: 197117267
GI number: 197117267
Start: 1030802
End: 1031569
Strand: Reverse
Name: mtnN [H]
Synonym: Gbem_0877
Alternate gene names: 197117267
Gene position: 1031569-1030802 (Counterclockwise)
Preceding gene: 197117272
Following gene: 197117226
Centisome position: 22.35
GC content: 65.36
Gene sequence:
>768_bases ATGAAGACAGAGTGCCTCGGGGCGGTGGCCGCCATGCCCCAGGAGATAGCCCCGCTTTTGCGACGGGTGCGGCGGTTCCA GAAGGAAAAGATCTCCGGGTTCAACCTGTACCGCTTCGACTGCGGCAGTACCCGCGTCGCCCTGATCGAATCCGGGATGG GGCCCGACCACGCGGCTCTTGCCACGGCAACCCTGATCCGGAGCGCCTCGCCGCATGTGATCCTCAACTTCGGGTTCTGC GGCGGCGTGCTCCCCGGCCTAACCGTAGGCGACCTGGTGCTGGCCGAGCGGGTCTTCGCGCTTGCCGGGGGGAGACTGAG CGAGGTGCTCACACCTCCTCTGCCGCTGACCTCCCCGATCCTGGAAAGCTGCCGCAAACACGGGCTCTCTTCCCGGCCCG GCTCCTTCATCACCGCCACCGGTGTGGTGAACAAGCGCGCGCTCGCGCAGACGCTGGAGGGATCGATTCACGAACCGGTG CTGGAAATGGAGAGTGCTGCGGTGTTCCGGGAGGCCGAAAAAGCCGGAATCGAAGCAGTGGCGCTCAGAGGGGTGAGCGA CCCGGCAGAGGAAGAACTTGGCTTCGACATCGCCGAGATCTGCGACTCGGAGCTGAACCTGAGCCCGTGGCGGCTCGTGC TCACCCTGGCCAAGAGACCTTCGCTGGTACCGCAGTTCATCCGGCTGGCGCGGAACTCCAAGGTAGCGGGGGCAAACCTG GCGCTCGGGGTGGAGCTGGCGCTTTTGGTGCTTAGCGAAACGCAGTAA
Upstream 100 bases:
>100_bases ATGTCGGCGCATCCAGTTTGTCAAGTTAACCCTCTTTGACATTGCGGCAAAAGCCCCGCTCTGTTAAAGTGCGCGAACCA AACTACAGGAGCGCCTGGCC
Downstream 100 bases:
>100_bases ACAAAAGGGTCAATCGAAGCTTTCGGAGAAGCGTGCCGCTATCTCTCCCTTCAAGTAGGCGTCCGCTTCGGCCGCGGTCG AAAAGGAAAGGGCGCGCGAG
Product: nucleoside phosphorylase
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKTECLGAVAAMPQEIAPLLRRVRRFQKEKISGFNLYRFDCGSTRVALIESGMGPDHAALATATLIRSASPHVILNFGFC GGVLPGLTVGDLVLAERVFALAGGRLSEVLTPPLPLTSPILESCRKHGLSSRPGSFITATGVVNKRALAQTLEGSIHEPV LEMESAAVFREAEKAGIEAVALRGVSDPAEEELGFDIAEICDSELNLSPWRLVLTLAKRPSLVPQFIRLARNSKVAGANL ALGVELALLVLSETQ
Sequences:
>Translated_255_residues MKTECLGAVAAMPQEIAPLLRRVRRFQKEKISGFNLYRFDCGSTRVALIESGMGPDHAALATATLIRSASPHVILNFGFC GGVLPGLTVGDLVLAERVFALAGGRLSEVLTPPLPLTSPILESCRKHGLSSRPGSFITATGVVNKRALAQTLEGSIHEPV LEMESAAVFREAEKAGIEAVALRGVSDPAEEELGFDIAEICDSELNLSPWRLVLTLAKRPSLVPQFIRLARNSKVAGANL ALGVELALLVLSETQ >Mature_255_residues MKTECLGAVAAMPQEIAPLLRRVRRFQKEKISGFNLYRFDCGSTRVALIESGMGPDHAALATATLIRSASPHVILNFGFC GGVLPGLTVGDLVLAERVFALAGGRLSEVLTPPLPLTSPILESCRKHGLSSRPGSFITATGVVNKRALAQTLEGSIHEPV LEMESAAVFREAEKAGIEAVALRGVSDPAEEELGFDIAEICDSELNLSPWRLVLTLAKRPSLVPQFIRLARNSKVAGANL ALGVELALLVLSETQ
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 27175; Mature: 27175
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTECLGAVAAMPQEIAPLLRRVRRFQKEKISGFNLYRFDCGSTRVALIESGMGPDHAAL CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHHH ATATLIRSASPHVILNFGFCGGVLPGLTVGDLVLAERVFALAGGRLSEVLTPPLPLTSPI HHHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHH LESCRKHGLSSRPGSFITATGVVNKRALAQTLEGSIHEPVLEMESAAVFREAEKAGIEAV HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHE ALRGVSDPAEEELGFDIAEICDSELNLSPWRLVLTLAKRPSLVPQFIRLARNSKVAGANL EECCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH ALGVELALLVLSETQ HHHHHHHHHHHCCCC >Mature Secondary Structure MKTECLGAVAAMPQEIAPLLRRVRRFQKEKISGFNLYRFDCGSTRVALIESGMGPDHAAL CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHHH ATATLIRSASPHVILNFGFCGGVLPGLTVGDLVLAERVFALAGGRLSEVLTPPLPLTSPI HHHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHH LESCRKHGLSSRPGSFITATGVVNKRALAQTLEGSIHEPVLEMESAAVFREAEKAGIEAV HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHE ALRGVSDPAEEELGFDIAEICDSELNLSPWRLVLTLAKRPSLVPQFIRLARNSKVAGANL EECCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH ALGVELALLVLSETQ HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA