| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117220
Identifier: 197117220
GI number: 197117220
Start: 979231
End: 979416
Strand: Reverse
Name: 197117220
Synonym: Gbem_0828
Alternate gene names: NA
Gene position: 979416-979231 (Counterclockwise)
Preceding gene: 197117221
Following gene: 197117217
Centisome position: 21.22
GC content: 60.75
Gene sequence:
>186_bases ATGTCATTCGCGCTTTATGTCGTCGGGTTCATGCTCGTCATCGGAGGCATCGCCTGGGCACTGGTCGAGGCTGGACTGGC CATGTTCAAGATAGCCATCGTCTGCATCATCCTCCTGGGGATCGCGATACTGACAGGGGTGGTGAAGACCCGTCCCAAGG ATCCGCCCAGGGGGCCGCTGGCGTGA
Upstream 100 bases:
>100_bases CTGCCTTTCAAGTTAACAAACACTAACCACAACCAACCAGAAACCATGCCGCGGCTCCCCCGGCACCTCCCCCAAAGCGG CATCCGTCAAGGAGGATCCC
Downstream 100 bases:
>100_bases CTGCACCATCGGCAACGGATAAACGAAGAGACCCGGGTCGAAGCTCGACCCGGGTCTCTTTTTGTTTCCTCTTGGGGCAA CCGTCACGGCGCCAGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSFALYVVGFMLVIGGIAWALVEAGLAMFKIAIVCIILLGIAILTGVVKTRPKDPPRGPLA
Sequences:
>Translated_61_residues MSFALYVVGFMLVIGGIAWALVEAGLAMFKIAIVCIILLGIAILTGVVKTRPKDPPRGPLA >Mature_60_residues SFALYVVGFMLVIGGIAWALVEAGLAMFKIAIVCIILLGIAILTGVVKTRPKDPPRGPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6397; Mature: 6266
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFALYVVGFMLVIGGIAWALVEAGLAMFKIAIVCIILLGIAILTGVVKTRPKDPPRGPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC A C >Mature Secondary Structure SFALYVVGFMLVIGGIAWALVEAGLAMFKIAIVCIILLGIAILTGVVKTRPKDPPRGPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA