| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117216
Identifier: 197117216
GI number: 197117216
Start: 976617
End: 977045
Strand: Reverse
Name: 197117216
Synonym: Gbem_0824
Alternate gene names: NA
Gene position: 977045-976617 (Counterclockwise)
Preceding gene: 197117217
Following gene: 197117210
Centisome position: 21.17
GC content: 59.21
Gene sequence:
>429_bases ATGAGGCTACCACTTATATTCTTTTCGCTGCTGGCGCTGATCTTCGCTTCTCGGGCGGCGGCCGCCGACTCCGACTGGGT CCTGGTCGACGAGAACCAGTATTCTGCCTTCTTCTATGACAGAAACGGCACTACCCCCGCAAGAGACGGCATGATTCAGG TAAGGACACGCGTGGTCTATACGGAGCAGGGAAGGAAGGAGGCGCTCAACGTGCTGCACGGATTGCCGGAGCCTTCCCGG CTGTACGAGTCGCGCTACATGTATCAGATCGACTGCGTCGAGAAGGAGGGGCGCTTGGTCGGCGTCACCCACTTCGACAA AAACGGCGCCATCCTTAGGTCCTCCGATTTGGGCGACACCACTGTGCTTGAGTATCTCCCTCCCGGCTCCCGCATGGCCA TCGTGGCCGAGGACAACTGCAAACCCTGA
Upstream 100 bases:
>100_bases CTGACCGACCTGGGAGCCGAGATGCAGAAGATAAGGGTACGGGCAGAGGAGATGGACTCCCGGCGTTAAGGGGAGACTCG TGGCTACAGGAGGTGACAAG
Downstream 100 bases:
>100_bases ACCCGGCGCTACTTGCTGCGGTACTCCTGCCGCAGCACCAGGTCCATCAGGACCAGTGCCGCCATCGACTCCACGATCGG GACCGCCCTGGGGACGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRLPLIFFSLLALIFASRAAAADSDWVLVDENQYSAFFYDRNGTTPARDGMIQVRTRVVYTEQGRKEALNVLHGLPEPSR LYESRYMYQIDCVEKEGRLVGVTHFDKNGAILRSSDLGDTTVLEYLPPGSRMAIVAEDNCKP
Sequences:
>Translated_142_residues MRLPLIFFSLLALIFASRAAAADSDWVLVDENQYSAFFYDRNGTTPARDGMIQVRTRVVYTEQGRKEALNVLHGLPEPSR LYESRYMYQIDCVEKEGRLVGVTHFDKNGAILRSSDLGDTTVLEYLPPGSRMAIVAEDNCKP >Mature_142_residues MRLPLIFFSLLALIFASRAAAADSDWVLVDENQYSAFFYDRNGTTPARDGMIQVRTRVVYTEQGRKEALNVLHGLPEPSR LYESRYMYQIDCVEKEGRLVGVTHFDKNGAILRSSDLGDTTVLEYLPPGSRMAIVAEDNCKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16022; Mature: 16022
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPLIFFSLLALIFASRAAAADSDWVLVDENQYSAFFYDRNGTTPARDGMIQVRTRVVY CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEE TEQGRKEALNVLHGLPEPSRLYESRYMYQIDCVEKEGRLVGVTHFDKNGAILRSSDLGDT ECCCHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCC TVLEYLPPGSRMAIVAEDNCKP EEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure MRLPLIFFSLLALIFASRAAAADSDWVLVDENQYSAFFYDRNGTTPARDGMIQVRTRVVY CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEE TEQGRKEALNVLHGLPEPSRLYESRYMYQIDCVEKEGRLVGVTHFDKNGAILRSSDLGDT ECCCHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCC TVLEYLPPGSRMAIVAEDNCKP EEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA